Protein–RNA interactions for Protein: Q06831

Sox4, Transcription factor SOX-4, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox4Q06831 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Sox4Q06831 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
Sox4Q06831 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Sox4Q06831 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Sox4Q06831 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Sox4Q06831 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Sox4Q06831 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Sox4Q06831 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Sox4Q06831 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Sox4Q06831 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Sox4Q06831 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC14.19□□□□□ -0.14
Sox4Q06831 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC14.18□□□□□ -0.14
Sox4Q06831 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Sox4Q06831 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Sox4Q06831 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Sox4Q06831 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Sox4Q06831 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Sox4Q06831 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Sox4Q06831 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Sox4Q06831 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Sox4Q06831 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Sox4Q06831 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Sox4Q06831 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Sox4Q06831 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Sox4Q06831 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Sox4Q06831 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Sox4Q06831 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Sox4Q06831 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Sox4Q06831 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Sox4Q06831 Gm15920-201ENSMUST00000118998 402 ntBASIC14.18□□□□□ -0.14
Sox4Q06831 Gm6222-201ENSMUST00000120787 396 ntBASIC14.18□□□□□ -0.14
Sox4Q06831 Gm9719-201ENSMUST00000162765 543 ntBASIC14.18□□□□□ -0.14
Sox4Q06831 AA543401-201ENSMUST00000164248 1269 ntBASIC14.18□□□□□ -0.14
Sox4Q06831 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Sox4Q06831 Gm27618-201ENSMUST00000183671 60 ntBASIC14.18□□□□□ -0.14
Sox4Q06831 Gm28630-201ENSMUST00000187806 498 ntBASIC14.18□□□□□ -0.14
Sox4Q06831 Gm44872-201ENSMUST00000207864 420 ntBASIC14.18□□□□□ -0.14
Sox4Q06831 Rbfox2-208ENSMUST00000227930 1218 ntBASIC14.18□□□□□ -0.14
Sox4Q06831 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Sox4Q06831 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC14.18□□□□□ -0.14
Sox4Q06831 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Sox4Q06831 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC14.18□□□□□ -0.14
Sox4Q06831 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Sox4Q06831 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Sox4Q06831 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Sox4Q06831 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Sox4Q06831 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Sox4Q06831 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Sox4Q06831 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Sox4Q06831 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Sox4Q06831 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Sox4Q06831 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Sox4Q06831 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Sox4Q06831 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Sox4Q06831 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC14.17□□□□□ -0.14
Sox4Q06831 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC14.17□□□□□ -0.14
Sox4Q06831 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Sox4Q06831 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Sox4Q06831 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Sox4Q06831 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC14.17□□□□□ -0.14
Sox4Q06831 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Sox4Q06831 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Sox4Q06831 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC14.17□□□□□ -0.14
Sox4Q06831 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Sox4Q06831 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Sox4Q06831 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Sox4Q06831 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC14.17□□□□□ -0.14
Sox4Q06831 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Sox4Q06831 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Sox4Q06831 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Sox4Q06831 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Sox4Q06831 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC14.17□□□□□ -0.14
Sox4Q06831 Gm14042-201ENSMUST00000120139 833 ntBASIC14.17□□□□□ -0.14
Sox4Q06831 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC14.17□□□□□ -0.14
Sox4Q06831 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Sox4Q06831 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC14.17□□□□□ -0.14
Sox4Q06831 AC149588.3-201ENSMUST00000227515 150 ntBASIC14.17□□□□□ -0.14
Sox4Q06831 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Sox4Q06831 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Sox4Q06831 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Sox4Q06831 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Sox4Q06831 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Sox4Q06831 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Sox4Q06831 Fbxl12-205ENSMUST00000140702 1555 ntBASIC14.17□□□□□ -0.14
Sox4Q06831 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Sox4Q06831 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Sox4Q06831 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Sox4Q06831 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Sox4Q06831 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Sox4Q06831 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC14.16□□□□□ -0.14
Sox4Q06831 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC14.16□□□□□ -0.14
Sox4Q06831 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Sox4Q06831 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC14.16□□□□□ -0.14
Sox4Q06831 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Sox4Q06831 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Sox4Q06831 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Sox4Q06831 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Sox4Q06831 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC14.16□□□□□ -0.14
Sox4Q06831 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC14.16□□□□□ -0.14
Sox4Q06831 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC14.16□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 40 ms