Protein–RNA interactions for Protein: Q05722

Col9a1, Collagen alpha-1(IX) chain, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a1Q05722 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Col9a1Q05722 Gm1335-201ENSMUST00000121653 386 ntBASIC14.1□□□□□ -0.15
Col9a1Q05722 Gm27246-201ENSMUST00000183611 1240 ntTSL 5 BASIC14.1□□□□□ -0.15
Col9a1Q05722 Gm6621-201ENSMUST00000193251 772 ntBASIC14.1□□□□□ -0.15
Col9a1Q05722 Gm2861-201ENSMUST00000199885 666 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Col9a1Q05722 2700097O09Rik-201ENSMUST00000021406 1105 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Col9a1Q05722 Nudt2-201ENSMUST00000030154 845 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Col9a1Q05722 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Col9a1Q05722 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Col9a1Q05722 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Col9a1Q05722 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Col9a1Q05722 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Col9a1Q05722 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Col9a1Q05722 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Col9a1Q05722 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Col9a1Q05722 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Col9a1Q05722 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Col9a1Q05722 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Col9a1Q05722 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Col9a1Q05722 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Col9a1Q05722 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Col9a1Q05722 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Col9a1Q05722 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Col9a1Q05722 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Col9a1Q05722 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Col9a1Q05722 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Col9a1Q05722 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Col9a1Q05722 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC14.09□□□□□ -0.15
Col9a1Q05722 Stpg3-202ENSMUST00000114363 1234 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Col9a1Q05722 Gm14130-201ENSMUST00000118417 987 ntBASIC14.09□□□□□ -0.15
Col9a1Q05722 Gm13612-201ENSMUST00000119276 390 ntBASIC14.09□□□□□ -0.15
Col9a1Q05722 G630018N14Rik-201ENSMUST00000135656 1231 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Col9a1Q05722 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Col9a1Q05722 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Col9a1Q05722 Gm9550-201ENSMUST00000161130 862 ntBASIC14.09□□□□□ -0.15
Col9a1Q05722 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC14.09□□□□□ -0.15
Col9a1Q05722 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC14.09□□□□□ -0.15
Col9a1Q05722 Gm37709-201ENSMUST00000195074 600 ntBASIC14.09□□□□□ -0.15
Col9a1Q05722 Gm20239-201ENSMUST00000196610 982 ntBASIC14.09□□□□□ -0.15
Col9a1Q05722 Gm5276-201ENSMUST00000196683 1047 ntBASIC14.09□□□□□ -0.15
Col9a1Q05722 Gm43584-201ENSMUST00000199762 605 ntTSL 3 BASIC14.09□□□□□ -0.15
Col9a1Q05722 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Col9a1Q05722 Gm6916-202ENSMUST00000205523 195 ntBASIC14.09□□□□□ -0.15
Col9a1Q05722 Fam24a-202ENSMUST00000207439 711 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Col9a1Q05722 Zmym2-202ENSMUST00000223669 1281 ntBASIC14.09□□□□□ -0.15
Col9a1Q05722 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC14.09□□□□□ -0.15
Col9a1Q05722 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Col9a1Q05722 Vmn1r11-201ENSMUST00000071304 900 ntAPPRIS P2 BASIC14.09□□□□□ -0.15
Col9a1Q05722 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Col9a1Q05722 BC028528-202ENSMUST00000090476 809 ntAPPRIS P3 TSL 2 BASIC14.09□□□□□ -0.15
Col9a1Q05722 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Col9a1Q05722 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Col9a1Q05722 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC14.09□□□□□ -0.15
Col9a1Q05722 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Col9a1Q05722 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Col9a1Q05722 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Col9a1Q05722 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Col9a1Q05722 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Col9a1Q05722 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Col9a1Q05722 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Col9a1Q05722 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Col9a1Q05722 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Col9a1Q05722 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC14.08□□□□□ -0.15
Col9a1Q05722 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.15
Col9a1Q05722 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC14.08□□□□□ -0.16
Col9a1Q05722 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Col9a1Q05722 Fbp1-201ENSMUST00000092888 1479 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Col9a1Q05722 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Col9a1Q05722 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Col9a1Q05722 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Col9a1Q05722 Defa-ps4-201ENSMUST00000118021 183 ntBASIC14.08□□□□□ -0.16
Col9a1Q05722 Gm14277-201ENSMUST00000121195 360 ntBASIC14.08□□□□□ -0.16
Col9a1Q05722 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Col9a1Q05722 Gm37229-201ENSMUST00000191643 732 ntTSL 3 BASIC14.08□□□□□ -0.16
Col9a1Q05722 Gm30667-201ENSMUST00000193120 870 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Col9a1Q05722 Gm37388-201ENSMUST00000193984 429 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Col9a1Q05722 Gm45219-201ENSMUST00000205602 465 ntBASIC14.08□□□□□ -0.16
Col9a1Q05722 Gm45186-201ENSMUST00000206874 478 ntBASIC14.08□□□□□ -0.16
Col9a1Q05722 Gm18212-201ENSMUST00000211678 889 ntBASIC14.08□□□□□ -0.16
Col9a1Q05722 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Col9a1Q05722 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Col9a1Q05722 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC14.08□□□□□ -0.16
Col9a1Q05722 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Col9a1Q05722 Ntrk2-205ENSMUST00000224402 2284 ntBASIC14.08□□□□□ -0.16
Col9a1Q05722 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Col9a1Q05722 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Col9a1Q05722 Etfrf1-207ENSMUST00000111726 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Col9a1Q05722 4930589L23Rik-201ENSMUST00000091023 1364 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Col9a1Q05722 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Col9a1Q05722 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Col9a1Q05722 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Col9a1Q05722 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC14.07□□□□□ -0.16
Col9a1Q05722 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Col9a1Q05722 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Col9a1Q05722 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC14.07□□□□□ -0.16
Col9a1Q05722 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Col9a1Q05722 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Col9a1Q05722 4930522L14Rik-201ENSMUST00000100937 599 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Col9a1Q05722 Gm15460-201ENSMUST00000118147 391 ntBASIC14.07□□□□□ -0.16
Col9a1Q05722 Gm11439-201ENSMUST00000118598 409 ntBASIC14.07□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms