Protein–RNA interactions for Protein: Q00422

Gabpa, GA-binding protein alpha chain, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GabpaQ00422 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
GabpaQ00422 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC16.34■□□□□ 0.21
GabpaQ00422 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
GabpaQ00422 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
GabpaQ00422 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
GabpaQ00422 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
GabpaQ00422 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
GabpaQ00422 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.21
GabpaQ00422 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
GabpaQ00422 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
GabpaQ00422 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
GabpaQ00422 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC16.33■□□□□ 0.2
GabpaQ00422 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
GabpaQ00422 Gm7653-201ENSMUST00000214567 508 ntBASIC16.33■□□□□ 0.2
GabpaQ00422 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC16.33■□□□□ 0.2
GabpaQ00422 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC16.33■□□□□ 0.2
GabpaQ00422 Gm9797-201ENSMUST00000052902 613 ntBASIC16.33■□□□□ 0.2
GabpaQ00422 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
GabpaQ00422 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
GabpaQ00422 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
GabpaQ00422 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
GabpaQ00422 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC16.33■□□□□ 0.2
GabpaQ00422 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
GabpaQ00422 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
GabpaQ00422 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
GabpaQ00422 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
GabpaQ00422 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC16.33■□□□□ 0.2
GabpaQ00422 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
GabpaQ00422 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
GabpaQ00422 Gm42632-201ENSMUST00000201707 2411 ntBASIC16.33■□□□□ 0.2
GabpaQ00422 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
GabpaQ00422 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
GabpaQ00422 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
GabpaQ00422 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
GabpaQ00422 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC16.32■□□□□ 0.2
GabpaQ00422 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
GabpaQ00422 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
GabpaQ00422 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
GabpaQ00422 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
GabpaQ00422 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
GabpaQ00422 AC154239.3-201ENSMUST00000226933 674 ntBASIC16.32■□□□□ 0.2
GabpaQ00422 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
GabpaQ00422 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
GabpaQ00422 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
GabpaQ00422 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
GabpaQ00422 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
GabpaQ00422 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
GabpaQ00422 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
GabpaQ00422 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC16.32■□□□□ 0.2
GabpaQ00422 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC16.32■□□□□ 0.2
GabpaQ00422 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
GabpaQ00422 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC16.32■□□□□ 0.2
GabpaQ00422 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC16.32■□□□□ 0.2
GabpaQ00422 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
GabpaQ00422 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
GabpaQ00422 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
GabpaQ00422 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
GabpaQ00422 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC16.31■□□□□ 0.2
GabpaQ00422 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
GabpaQ00422 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
GabpaQ00422 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
GabpaQ00422 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
GabpaQ00422 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
GabpaQ00422 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
GabpaQ00422 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
GabpaQ00422 Gm15957-201ENSMUST00000118893 974 ntBASIC16.31■□□□□ 0.2
GabpaQ00422 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC16.31■□□□□ 0.2
GabpaQ00422 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC16.31■□□□□ 0.2
GabpaQ00422 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC16.31■□□□□ 0.2
GabpaQ00422 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
GabpaQ00422 Ighv1-25-201ENSMUST00000195638 345 ntBASIC16.31■□□□□ 0.2
GabpaQ00422 AC153872.1-201ENSMUST00000199539 128 ntBASIC16.31■□□□□ 0.2
GabpaQ00422 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
GabpaQ00422 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC16.31■□□□□ 0.2
GabpaQ00422 AC154806.6-201ENSMUST00000228192 202 ntBASIC16.31■□□□□ 0.2
GabpaQ00422 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
GabpaQ00422 Gm6180-201ENSMUST00000065243 498 ntBASIC16.31■□□□□ 0.2
GabpaQ00422 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
GabpaQ00422 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
GabpaQ00422 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
GabpaQ00422 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
GabpaQ00422 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC16.31■□□□□ 0.2
GabpaQ00422 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
GabpaQ00422 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
GabpaQ00422 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
GabpaQ00422 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
GabpaQ00422 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
GabpaQ00422 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
GabpaQ00422 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
GabpaQ00422 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
GabpaQ00422 Carlr-201ENSMUST00000181515 2574 ntBASIC16.31■□□□□ 0.2
GabpaQ00422 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
GabpaQ00422 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
GabpaQ00422 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC16.3■□□□□ 0.2
GabpaQ00422 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
GabpaQ00422 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
GabpaQ00422 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC16.3■□□□□ 0.2
GabpaQ00422 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
GabpaQ00422 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
GabpaQ00422 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms