Protein–RNA interactions for Protein: P97770

Thumpd3, THUMP domain-containing protein 3, mousemouse

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thumpd3P97770 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
Thumpd3P97770 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Thumpd3P97770 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Thumpd3P97770 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Thumpd3P97770 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Thumpd3P97770 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Thumpd3P97770 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
Thumpd3P97770 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Thumpd3P97770 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Thumpd3P97770 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Thumpd3P97770 Gm5253-201ENSMUST00000187104 1025 ntBASIC14.7□□□□□ -0.06
Thumpd3P97770 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC14.7□□□□□ -0.06
Thumpd3P97770 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
Thumpd3P97770 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
Thumpd3P97770 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Thumpd3P97770 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Thumpd3P97770 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Thumpd3P97770 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
Thumpd3P97770 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
Thumpd3P97770 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Thumpd3P97770 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC14.7□□□□□ -0.06
Thumpd3P97770 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Thumpd3P97770 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Thumpd3P97770 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Thumpd3P97770 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Thumpd3P97770 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Thumpd3P97770 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Thumpd3P97770 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Thumpd3P97770 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC14.7□□□□□ -0.06
Thumpd3P97770 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Thumpd3P97770 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Thumpd3P97770 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Thumpd3P97770 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC14.69□□□□□ -0.06
Thumpd3P97770 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Thumpd3P97770 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Thumpd3P97770 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC14.69□□□□□ -0.06
Thumpd3P97770 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
Thumpd3P97770 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Thumpd3P97770 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Thumpd3P97770 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Thumpd3P97770 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Thumpd3P97770 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Thumpd3P97770 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC14.69□□□□□ -0.06
Thumpd3P97770 Gm44981-201ENSMUST00000205549 1943 ntBASIC14.69□□□□□ -0.06
Thumpd3P97770 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
Thumpd3P97770 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Thumpd3P97770 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Thumpd3P97770 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Thumpd3P97770 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC14.69□□□□□ -0.06
Thumpd3P97770 Gm4913-201ENSMUST00000117075 1290 ntBASIC14.69□□□□□ -0.06
Thumpd3P97770 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Thumpd3P97770 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Thumpd3P97770 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Thumpd3P97770 Gm27300-201ENSMUST00000184085 97 ntBASIC14.69□□□□□ -0.06
Thumpd3P97770 Gm27335-201ENSMUST00000184758 97 ntBASIC14.69□□□□□ -0.06
Thumpd3P97770 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC14.69□□□□□ -0.06
Thumpd3P97770 Gm7229-201ENSMUST00000214719 1007 ntBASIC14.69□□□□□ -0.06
Thumpd3P97770 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Thumpd3P97770 AC164567.1-201ENSMUST00000219185 960 ntBASIC14.69□□□□□ -0.06
Thumpd3P97770 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Thumpd3P97770 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Thumpd3P97770 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Thumpd3P97770 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Thumpd3P97770 Gm10175-201ENSMUST00000086013 645 ntBASIC14.69□□□□□ -0.06
Thumpd3P97770 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Thumpd3P97770 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC14.69□□□□□ -0.06
Thumpd3P97770 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC14.69□□□□□ -0.06
Thumpd3P97770 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Thumpd3P97770 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Thumpd3P97770 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
Thumpd3P97770 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC14.69□□□□□ -0.06
Thumpd3P97770 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Thumpd3P97770 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Thumpd3P97770 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Thumpd3P97770 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Thumpd3P97770 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
Thumpd3P97770 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Thumpd3P97770 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Thumpd3P97770 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Thumpd3P97770 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Thumpd3P97770 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Thumpd3P97770 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Thumpd3P97770 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC14.69□□□□□ -0.06
Thumpd3P97770 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC14.69□□□□□ -0.06
Thumpd3P97770 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
Thumpd3P97770 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Thumpd3P97770 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Thumpd3P97770 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Thumpd3P97770 Gm43399-201ENSMUST00000202546 2374 ntBASIC14.68□□□□□ -0.06
Thumpd3P97770 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Thumpd3P97770 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Thumpd3P97770 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Thumpd3P97770 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Thumpd3P97770 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Thumpd3P97770 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Thumpd3P97770 Gm25911-201ENSMUST00000157621 56 ntBASIC14.68□□□□□ -0.06
Thumpd3P97770 Gm18489-201ENSMUST00000172565 551 ntBASIC14.68□□□□□ -0.06
Thumpd3P97770 Gm9682-201ENSMUST00000197505 556 ntBASIC14.68□□□□□ -0.06
Thumpd3P97770 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC14.68□□□□□ -0.06
Thumpd3P97770 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms