Protein–RNA interactions for Protein: P86449

Trim43c, Tripartite motif-containing protein 43C, mousemouse

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43cP86449 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC15.7■□□□□ 0.1
Trim43cP86449 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trim43cP86449 Gm43575-201ENSMUST00000196420 516 ntBASIC15.7■□□□□ 0.1
Trim43cP86449 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC15.7■□□□□ 0.1
Trim43cP86449 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Trim43cP86449 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trim43cP86449 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trim43cP86449 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trim43cP86449 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trim43cP86449 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trim43cP86449 Gm37411-201ENSMUST00000194180 2282 ntBASIC15.7■□□□□ 0.1
Trim43cP86449 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Trim43cP86449 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Trim43cP86449 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trim43cP86449 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trim43cP86449 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Trim43cP86449 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trim43cP86449 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trim43cP86449 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trim43cP86449 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Trim43cP86449 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Trim43cP86449 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trim43cP86449 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Trim43cP86449 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trim43cP86449 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
Trim43cP86449 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC15.69■□□□□ 0.1
Trim43cP86449 Gm6539-201ENSMUST00000119157 1064 ntBASIC15.69■□□□□ 0.1
Trim43cP86449 Gm13823-201ENSMUST00000119930 345 ntBASIC15.69■□□□□ 0.1
Trim43cP86449 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC15.69■□□□□ 0.1
Trim43cP86449 Gm18766-201ENSMUST00000189811 808 ntBASIC15.69■□□□□ 0.1
Trim43cP86449 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Trim43cP86449 Gm43073-201ENSMUST00000198200 1189 ntBASIC15.69■□□□□ 0.1
Trim43cP86449 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC15.69■□□□□ 0.1
Trim43cP86449 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC15.69■□□□□ 0.1
Trim43cP86449 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC15.69■□□□□ 0.1
Trim43cP86449 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC15.69■□□□□ 0.1
Trim43cP86449 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Trim43cP86449 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC15.69■□□□□ 0.1
Trim43cP86449 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trim43cP86449 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trim43cP86449 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Trim43cP86449 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trim43cP86449 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trim43cP86449 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trim43cP86449 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trim43cP86449 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC15.68■□□□□ 0.1
Trim43cP86449 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Trim43cP86449 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trim43cP86449 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Trim43cP86449 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trim43cP86449 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trim43cP86449 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trim43cP86449 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Trim43cP86449 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trim43cP86449 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC15.68■□□□□ 0.1
Trim43cP86449 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Trim43cP86449 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Trim43cP86449 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trim43cP86449 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trim43cP86449 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trim43cP86449 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC15.68■□□□□ 0.1
Trim43cP86449 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC15.68■□□□□ 0.1
Trim43cP86449 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trim43cP86449 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Trim43cP86449 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Trim43cP86449 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Trim43cP86449 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Trim43cP86449 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC15.68■□□□□ 0.1
Trim43cP86449 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC15.68■□□□□ 0.1
Trim43cP86449 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Trim43cP86449 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC15.67■□□□□ 0.1
Trim43cP86449 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trim43cP86449 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Trim43cP86449 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC15.67■□□□□ 0.1
Trim43cP86449 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trim43cP86449 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trim43cP86449 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trim43cP86449 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Trim43cP86449 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC15.67■□□□□ 0.1
Trim43cP86449 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC15.67■□□□□ 0.1
Trim43cP86449 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC15.67■□□□□ 0.1
Trim43cP86449 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trim43cP86449 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC15.67■□□□□ 0.1
Trim43cP86449 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trim43cP86449 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Trim43cP86449 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC15.67■□□□□ 0.1
Trim43cP86449 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trim43cP86449 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Trim43cP86449 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trim43cP86449 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trim43cP86449 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC15.67■□□□□ 0.1
Trim43cP86449 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Trim43cP86449 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trim43cP86449 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trim43cP86449 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trim43cP86449 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trim43cP86449 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trim43cP86449 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trim43cP86449 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trim43cP86449 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 38.3 ms