Protein–RNA interactions for Protein: P84244

H3f3a, Histone H3.3, mousemouse

Known RBP Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3f3aP84244 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
H3f3aP84244 Gm9856-201ENSMUST00000217077 2578 ntBASIC12.85□□□□□ -0.35
H3f3aP84244 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
H3f3aP84244 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
H3f3aP84244 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
H3f3aP84244 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
H3f3aP84244 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
H3f3aP84244 Gm12134-201ENSMUST00000122109 520 ntBASIC12.85□□□□□ -0.35
H3f3aP84244 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC12.85□□□□□ -0.35
H3f3aP84244 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
H3f3aP84244 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC12.85□□□□□ -0.35
H3f3aP84244 Gm9824-201ENSMUST00000178707 561 ntBASIC12.85□□□□□ -0.35
H3f3aP84244 AC155729.1-201ENSMUST00000227758 544 ntBASIC12.85□□□□□ -0.35
H3f3aP84244 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
H3f3aP84244 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
H3f3aP84244 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
H3f3aP84244 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
H3f3aP84244 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC12.85□□□□□ -0.35
H3f3aP84244 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
H3f3aP84244 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
H3f3aP84244 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC12.85□□□□□ -0.35
H3f3aP84244 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
H3f3aP84244 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
H3f3aP84244 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
H3f3aP84244 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC12.85□□□□□ -0.35
H3f3aP84244 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
H3f3aP84244 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
H3f3aP84244 Gm10676-201ENSMUST00000098778 3221 ntBASIC12.84□□□□□ -0.35
H3f3aP84244 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
H3f3aP84244 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
H3f3aP84244 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
H3f3aP84244 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
H3f3aP84244 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
H3f3aP84244 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
H3f3aP84244 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
H3f3aP84244 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
H3f3aP84244 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
H3f3aP84244 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
H3f3aP84244 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
H3f3aP84244 Gm29541-201ENSMUST00000191351 678 ntBASIC12.84□□□□□ -0.35
H3f3aP84244 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC12.84□□□□□ -0.35
H3f3aP84244 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
H3f3aP84244 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
H3f3aP84244 Gm5867-201ENSMUST00000063197 592 ntBASIC12.84□□□□□ -0.35
H3f3aP84244 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
H3f3aP84244 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
H3f3aP84244 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
H3f3aP84244 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
H3f3aP84244 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
H3f3aP84244 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
H3f3aP84244 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
H3f3aP84244 Gm44981-201ENSMUST00000205549 1943 ntBASIC12.84□□□□□ -0.35
H3f3aP84244 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
H3f3aP84244 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.35
H3f3aP84244 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.35
H3f3aP84244 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
H3f3aP84244 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
H3f3aP84244 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
H3f3aP84244 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
H3f3aP84244 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
H3f3aP84244 Mir449b-201ENSMUST00000104833 80 ntBASIC12.83□□□□□ -0.36
H3f3aP84244 Gm24158-201ENSMUST00000175263 71 ntBASIC12.83□□□□□ -0.36
H3f3aP84244 Gm10253-201ENSMUST00000194270 940 ntBASIC12.83□□□□□ -0.36
H3f3aP84244 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
H3f3aP84244 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
H3f3aP84244 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC12.83□□□□□ -0.36
H3f3aP84244 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
H3f3aP84244 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC12.83□□□□□ -0.36
H3f3aP84244 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC12.83□□□□□ -0.36
H3f3aP84244 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
H3f3aP84244 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
H3f3aP84244 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
H3f3aP84244 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC12.83□□□□□ -0.36
H3f3aP84244 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
H3f3aP84244 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
H3f3aP84244 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
H3f3aP84244 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC12.82□□□□□ -0.36
H3f3aP84244 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
H3f3aP84244 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
H3f3aP84244 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
H3f3aP84244 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
H3f3aP84244 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC12.82□□□□□ -0.36
H3f3aP84244 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
H3f3aP84244 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
H3f3aP84244 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
H3f3aP84244 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC12.82□□□□□ -0.36
H3f3aP84244 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
H3f3aP84244 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
H3f3aP84244 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
H3f3aP84244 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
H3f3aP84244 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
H3f3aP84244 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
H3f3aP84244 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
H3f3aP84244 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
H3f3aP84244 Gm14701-201ENSMUST00000117156 348 ntBASIC12.82□□□□□ -0.36
H3f3aP84244 Gm15693-201ENSMUST00000120470 637 ntBASIC12.82□□□□□ -0.36
H3f3aP84244 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
H3f3aP84244 Gm29310-201ENSMUST00000185468 696 ntBASIC12.82□□□□□ -0.36
H3f3aP84244 Gm21825-201ENSMUST00000185728 696 ntBASIC12.82□□□□□ -0.36
H3f3aP84244 Gm29109-201ENSMUST00000185895 696 ntBASIC12.82□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms