Protein–RNA interactions for Protein: P70354

Msx3, Homeobox protein MSX-3, mousemouse

Predictions only

Length 204 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msx3P70354 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Msx3P70354 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC14.84□□□□□ -0.03
Msx3P70354 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Msx3P70354 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Msx3P70354 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Msx3P70354 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Msx3P70354 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Msx3P70354 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Msx3P70354 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.03
Msx3P70354 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Msx3P70354 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Msx3P70354 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
Msx3P70354 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.03
Msx3P70354 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.03
Msx3P70354 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
Msx3P70354 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.03
Msx3P70354 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Msx3P70354 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Msx3P70354 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
Msx3P70354 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC14.83□□□□□ -0.04
Msx3P70354 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Msx3P70354 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC14.83□□□□□ -0.04
Msx3P70354 Gm15467-201ENSMUST00000120582 445 ntBASIC14.83□□□□□ -0.04
Msx3P70354 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Msx3P70354 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Msx3P70354 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Msx3P70354 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC14.83□□□□□ -0.04
Msx3P70354 Bloc1s5-203ENSMUST00000224902 612 ntBASIC14.83□□□□□ -0.04
Msx3P70354 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Msx3P70354 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Msx3P70354 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
Msx3P70354 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC14.83□□□□□ -0.04
Msx3P70354 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Msx3P70354 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Msx3P70354 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Msx3P70354 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Msx3P70354 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Msx3P70354 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Msx3P70354 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Msx3P70354 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Msx3P70354 Gm21451-201ENSMUST00000111062 2775 ntBASIC14.83□□□□□ -0.04
Msx3P70354 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC14.83□□□□□ -0.04
Msx3P70354 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Msx3P70354 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC14.83□□□□□ -0.04
Msx3P70354 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Msx3P70354 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Msx3P70354 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Msx3P70354 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Msx3P70354 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Msx3P70354 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Msx3P70354 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Msx3P70354 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Msx3P70354 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC14.82□□□□□ -0.04
Msx3P70354 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Msx3P70354 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Msx3P70354 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Msx3P70354 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Msx3P70354 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Msx3P70354 Gm45612-201ENSMUST00000211320 160 ntBASIC14.82□□□□□ -0.04
Msx3P70354 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Msx3P70354 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC14.82□□□□□ -0.04
Msx3P70354 AC123645.1-201ENSMUST00000228469 605 ntBASIC14.82□□□□□ -0.04
Msx3P70354 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Msx3P70354 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Msx3P70354 Gpr146-202ENSMUST00000053120 1040 ntBASIC14.82□□□□□ -0.04
Msx3P70354 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Msx3P70354 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Msx3P70354 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC14.82□□□□□ -0.04
Msx3P70354 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Msx3P70354 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC14.82□□□□□ -0.04
Msx3P70354 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Msx3P70354 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Msx3P70354 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Msx3P70354 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC14.81□□□□□ -0.04
Msx3P70354 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Msx3P70354 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Msx3P70354 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC14.81□□□□□ -0.04
Msx3P70354 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Msx3P70354 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Msx3P70354 Gm12017-201ENSMUST00000122453 1003 ntBASIC14.81□□□□□ -0.04
Msx3P70354 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Msx3P70354 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Msx3P70354 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Msx3P70354 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Msx3P70354 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Msx3P70354 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Msx3P70354 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Msx3P70354 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Msx3P70354 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC14.81□□□□□ -0.04
Msx3P70354 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Msx3P70354 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Msx3P70354 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Msx3P70354 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Msx3P70354 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Msx3P70354 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Msx3P70354 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Msx3P70354 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Msx3P70354 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Msx3P70354 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Msx3P70354 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms