Protein–RNA interactions for Protein: P62313

Lsm6, U6 snRNA-associated Sm-like protein LSm6, mousemouse

Known RBP Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm6P62313 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC12.67□□□□□ -0.38
Lsm6P62313 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Lsm6P62313 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Lsm6P62313 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Lsm6P62313 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Lsm6P62313 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC12.66□□□□□ -0.38
Lsm6P62313 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Lsm6P62313 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Lsm6P62313 Gm42934-201ENSMUST00000196920 1345 ntBASIC12.66□□□□□ -0.38
Lsm6P62313 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Lsm6P62313 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Lsm6P62313 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Lsm6P62313 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC12.66□□□□□ -0.38
Lsm6P62313 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Lsm6P62313 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Lsm6P62313 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Lsm6P62313 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Lsm6P62313 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Lsm6P62313 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Lsm6P62313 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Lsm6P62313 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Lsm6P62313 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC12.66□□□□□ -0.38
Lsm6P62313 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC12.66□□□□□ -0.38
Lsm6P62313 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Lsm6P62313 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Lsm6P62313 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Lsm6P62313 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Lsm6P62313 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Lsm6P62313 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Lsm6P62313 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC12.66□□□□□ -0.38
Lsm6P62313 Gm18057-201ENSMUST00000208220 503 ntBASIC12.66□□□□□ -0.38
Lsm6P62313 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Lsm6P62313 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Lsm6P62313 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Lsm6P62313 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Lsm6P62313 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Lsm6P62313 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC12.66□□□□□ -0.38
Lsm6P62313 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Lsm6P62313 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Lsm6P62313 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Lsm6P62313 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Lsm6P62313 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Lsm6P62313 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Lsm6P62313 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Lsm6P62313 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC12.66□□□□□ -0.38
Lsm6P62313 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Lsm6P62313 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Lsm6P62313 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Lsm6P62313 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Lsm6P62313 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC12.66□□□□□ -0.38
Lsm6P62313 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Lsm6P62313 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Lsm6P62313 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Lsm6P62313 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Lsm6P62313 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Lsm6P62313 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Lsm6P62313 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Lsm6P62313 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Lsm6P62313 Sorbs3-204ENSMUST00000227929 2460 ntBASIC12.65□□□□□ -0.38
Lsm6P62313 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Lsm6P62313 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC12.65□□□□□ -0.38
Lsm6P62313 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Lsm6P62313 Gm4913-201ENSMUST00000117075 1290 ntBASIC12.65□□□□□ -0.38
Lsm6P62313 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC12.65□□□□□ -0.38
Lsm6P62313 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Lsm6P62313 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC12.65□□□□□ -0.38
Lsm6P62313 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC12.65□□□□□ -0.38
Lsm6P62313 AC131187.1-201ENSMUST00000224567 809 ntBASIC12.65□□□□□ -0.38
Lsm6P62313 AC123645.1-201ENSMUST00000228469 605 ntBASIC12.65□□□□□ -0.38
Lsm6P62313 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Lsm6P62313 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Lsm6P62313 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC12.65□□□□□ -0.38
Lsm6P62313 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Lsm6P62313 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC12.65□□□□□ -0.39
Lsm6P62313 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Lsm6P62313 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Lsm6P62313 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Lsm6P62313 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
Lsm6P62313 Gm45630-201ENSMUST00000210243 1911 ntBASIC12.64□□□□□ -0.39
Lsm6P62313 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC12.64□□□□□ -0.39
Lsm6P62313 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Lsm6P62313 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Lsm6P62313 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Lsm6P62313 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Lsm6P62313 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC12.64□□□□□ -0.39
Lsm6P62313 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Lsm6P62313 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC12.64□□□□□ -0.39
Lsm6P62313 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC12.64□□□□□ -0.39
Lsm6P62313 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC12.64□□□□□ -0.39
Lsm6P62313 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC12.64□□□□□ -0.39
Lsm6P62313 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC12.64□□□□□ -0.39
Lsm6P62313 Gm5628-201ENSMUST00000222318 1049 ntBASIC12.64□□□□□ -0.39
Lsm6P62313 Ndufaf2-202ENSMUST00000223734 556 ntBASIC12.64□□□□□ -0.39
Lsm6P62313 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC12.64□□□□□ -0.39
Lsm6P62313 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Lsm6P62313 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Lsm6P62313 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Lsm6P62313 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Lsm6P62313 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Lsm6P62313 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 39.5 ms