Protein–RNA interactions for Protein: P62046

Lrch1, Leucine-rich repeat and calponin homology domain-containing protein 1, mousemouse

Predictions only

Length 709 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrch1P62046 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Lrch1P62046 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Lrch1P62046 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC16.9■□□□□ 0.3
Lrch1P62046 Gm18905-201ENSMUST00000205454 928 ntBASIC16.9■□□□□ 0.3
Lrch1P62046 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC16.9■□□□□ 0.3
Lrch1P62046 Net1-207ENSMUST00000223258 597 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Lrch1P62046 Trpt1-201ENSMUST00000088223 1142 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Lrch1P62046 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Lrch1P62046 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Lrch1P62046 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Lrch1P62046 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Lrch1P62046 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC16.9■□□□□ 0.3
Lrch1P62046 Ablim2-203ENSMUST00000114203 1333 ntTSL 5 BASIC16.9■□□□□ 0.3
Lrch1P62046 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Lrch1P62046 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC16.9■□□□□ 0.3
Lrch1P62046 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
Lrch1P62046 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Lrch1P62046 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Lrch1P62046 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Lrch1P62046 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Lrch1P62046 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Lrch1P62046 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Lrch1P62046 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Lrch1P62046 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
Lrch1P62046 Gm12384-201ENSMUST00000119228 919 ntBASIC16.89■□□□□ 0.29
Lrch1P62046 Gm11524-201ENSMUST00000119349 807 ntBASIC16.89■□□□□ 0.29
Lrch1P62046 Gm8801-201ENSMUST00000173255 1064 ntBASIC16.89■□□□□ 0.29
Lrch1P62046 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Lrch1P62046 Hspb9-201ENSMUST00000017976 652 ntAPPRIS ALT2 BASIC16.89■□□□□ 0.29
Lrch1P62046 Gm5370-201ENSMUST00000187187 574 ntBASIC16.89■□□□□ 0.29
Lrch1P62046 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC16.89■□□□□ 0.29
Lrch1P62046 Gm18054-201ENSMUST00000207539 555 ntBASIC16.89■□□□□ 0.29
Lrch1P62046 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC16.89■□□□□ 0.29
Lrch1P62046 Gemin7-201ENSMUST00000051364 763 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Lrch1P62046 Olfr1209-201ENSMUST00000099809 933 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
Lrch1P62046 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Lrch1P62046 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Lrch1P62046 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Lrch1P62046 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
Lrch1P62046 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
Lrch1P62046 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Lrch1P62046 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Lrch1P62046 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Lrch1P62046 AC093043.3-201ENSMUST00000226531 2273 ntBASIC16.89■□□□□ 0.29
Lrch1P62046 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Lrch1P62046 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Lrch1P62046 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Lrch1P62046 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Lrch1P62046 Vax2os-201ENSMUST00000123402 1435 ntTSL 5 BASIC16.88■□□□□ 0.29
Lrch1P62046 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Lrch1P62046 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Lrch1P62046 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Lrch1P62046 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Lrch1P62046 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Lrch1P62046 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC16.88■□□□□ 0.29
Lrch1P62046 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Lrch1P62046 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Lrch1P62046 Dctn4-202ENSMUST00000223590 1530 ntBASIC16.88■□□□□ 0.29
Lrch1P62046 Tmem254b-202ENSMUST00000100806 1108 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Lrch1P62046 Tmem254a-201ENSMUST00000100811 1108 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Lrch1P62046 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Lrch1P62046 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC16.88■□□□□ 0.29
Lrch1P62046 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC16.88■□□□□ 0.29
Lrch1P62046 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC16.88■□□□□ 0.29
Lrch1P62046 Gm43094-201ENSMUST00000196549 921 ntBASIC16.88■□□□□ 0.29
Lrch1P62046 Gm20083-202ENSMUST00000206663 1008 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Lrch1P62046 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC16.88■□□□□ 0.29
Lrch1P62046 Gm36198-201ENSMUST00000217490 416 ntTSL 3 BASIC16.88■□□□□ 0.29
Lrch1P62046 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Lrch1P62046 Polr2e-201ENSMUST00000004786 1148 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Lrch1P62046 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC16.88■□□□□ 0.29
Lrch1P62046 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Lrch1P62046 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Lrch1P62046 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Lrch1P62046 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC16.88■□□□□ 0.29
Lrch1P62046 Gm45212-201ENSMUST00000205831 3403 ntBASIC16.88■□□□□ 0.29
Lrch1P62046 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Lrch1P62046 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Lrch1P62046 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Lrch1P62046 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Lrch1P62046 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Lrch1P62046 Gm7553-201ENSMUST00000185805 1426 ntBASIC16.87■□□□□ 0.29
Lrch1P62046 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Lrch1P62046 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Lrch1P62046 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Lrch1P62046 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Lrch1P62046 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Lrch1P62046 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC16.87■□□□□ 0.29
Lrch1P62046 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Lrch1P62046 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
Lrch1P62046 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
Lrch1P62046 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Lrch1P62046 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Lrch1P62046 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Lrch1P62046 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC16.87■□□□□ 0.29
Lrch1P62046 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC16.87■□□□□ 0.29
Lrch1P62046 Gm15869-201ENSMUST00000126427 734 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Lrch1P62046 Gm15635-202ENSMUST00000131160 917 ntTSL 3 BASIC16.87■□□□□ 0.29
Lrch1P62046 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Lrch1P62046 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC16.87■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms