Protein–RNA interactions for Protein: P61620

Sec61a1, Protein transport protein Sec61 subunit alpha isoform 1, mousemouse

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a1P61620 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Sec61a1P61620 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Sec61a1P61620 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Sec61a1P61620 Gm11873-201ENSMUST00000117877 1304 ntBASIC12.74□□□□□ -0.37
Sec61a1P61620 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Sec61a1P61620 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC12.74□□□□□ -0.37
Sec61a1P61620 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Sec61a1P61620 Gm27300-201ENSMUST00000184085 97 ntBASIC12.74□□□□□ -0.37
Sec61a1P61620 Gm27335-201ENSMUST00000184758 97 ntBASIC12.74□□□□□ -0.37
Sec61a1P61620 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Sec61a1P61620 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC12.74□□□□□ -0.37
Sec61a1P61620 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Sec61a1P61620 Gm5867-201ENSMUST00000063197 592 ntBASIC12.74□□□□□ -0.37
Sec61a1P61620 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Sec61a1P61620 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Sec61a1P61620 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Sec61a1P61620 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Sec61a1P61620 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Sec61a1P61620 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Sec61a1P61620 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC12.74□□□□□ -0.37
Sec61a1P61620 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Sec61a1P61620 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Sec61a1P61620 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Sec61a1P61620 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Sec61a1P61620 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Sec61a1P61620 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC12.74□□□□□ -0.37
Sec61a1P61620 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Sec61a1P61620 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC12.74□□□□□ -0.37
Sec61a1P61620 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Sec61a1P61620 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Sec61a1P61620 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Sec61a1P61620 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC12.73□□□□□ -0.37
Sec61a1P61620 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC12.73□□□□□ -0.37
Sec61a1P61620 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Sec61a1P61620 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Sec61a1P61620 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Sec61a1P61620 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC12.73□□□□□ -0.37
Sec61a1P61620 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Sec61a1P61620 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Sec61a1P61620 Gm4995-201ENSMUST00000117247 432 ntBASIC12.73□□□□□ -0.37
Sec61a1P61620 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Sec61a1P61620 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Sec61a1P61620 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC12.73□□□□□ -0.37
Sec61a1P61620 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Sec61a1P61620 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Sec61a1P61620 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Sec61a1P61620 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Sec61a1P61620 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Sec61a1P61620 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Sec61a1P61620 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Sec61a1P61620 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC12.73□□□□□ -0.37
Sec61a1P61620 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Sec61a1P61620 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Sec61a1P61620 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Sec61a1P61620 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC12.73□□□□□ -0.37
Sec61a1P61620 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Sec61a1P61620 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Sec61a1P61620 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC12.73□□□□□ -0.37
Sec61a1P61620 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Sec61a1P61620 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Sec61a1P61620 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Sec61a1P61620 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Sec61a1P61620 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Sec61a1P61620 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Sec61a1P61620 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Sec61a1P61620 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Sec61a1P61620 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Sec61a1P61620 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Sec61a1P61620 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Sec61a1P61620 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Sec61a1P61620 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Sec61a1P61620 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Sec61a1P61620 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Sec61a1P61620 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Sec61a1P61620 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC12.72□□□□□ -0.37
Sec61a1P61620 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC12.72□□□□□ -0.37
Sec61a1P61620 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Sec61a1P61620 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Sec61a1P61620 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Sec61a1P61620 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC12.72□□□□□ -0.37
Sec61a1P61620 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC12.72□□□□□ -0.37
Sec61a1P61620 Gm37935-201ENSMUST00000192012 982 ntBASIC12.72□□□□□ -0.37
Sec61a1P61620 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC12.72□□□□□ -0.37
Sec61a1P61620 Gm7787-201ENSMUST00000216858 688 ntBASIC12.72□□□□□ -0.37
Sec61a1P61620 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Sec61a1P61620 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Sec61a1P61620 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Sec61a1P61620 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Sec61a1P61620 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC12.72□□□□□ -0.37
Sec61a1P61620 Gm44645-201ENSMUST00000205492 1653 ntBASIC12.72□□□□□ -0.37
Sec61a1P61620 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Sec61a1P61620 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC12.72□□□□□ -0.37
Sec61a1P61620 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Sec61a1P61620 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Sec61a1P61620 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Sec61a1P61620 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC12.72□□□□□ -0.37
Sec61a1P61620 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Sec61a1P61620 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Sec61a1P61620 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Sec61a1P61620 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 39.1 ms