Protein–RNA interactions for Protein: P53798

Fdft1, Squalene synthase, mousemouse

Predictions only

Length 416 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fdft1P53798 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Fdft1P53798 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Fdft1P53798 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Fdft1P53798 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Fdft1P53798 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Fdft1P53798 AC121805.2-201ENSMUST00000218808 2538 ntBASIC14.42□□□□□ -0.1
Fdft1P53798 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Fdft1P53798 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Fdft1P53798 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Fdft1P53798 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Fdft1P53798 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Fdft1P53798 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Fdft1P53798 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Fdft1P53798 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Fdft1P53798 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC14.42□□□□□ -0.1
Fdft1P53798 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC14.42□□□□□ -0.1
Fdft1P53798 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Fdft1P53798 Gm9385-201ENSMUST00000117563 472 ntBASIC14.42□□□□□ -0.1
Fdft1P53798 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC14.42□□□□□ -0.1
Fdft1P53798 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Fdft1P53798 Gm44771-201ENSMUST00000206975 626 ntBASIC14.42□□□□□ -0.1
Fdft1P53798 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC14.42□□□□□ -0.1
Fdft1P53798 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Fdft1P53798 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Fdft1P53798 AC154572.2-201ENSMUST00000225105 997 ntBASIC14.42□□□□□ -0.1
Fdft1P53798 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Fdft1P53798 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Fdft1P53798 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Fdft1P53798 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Fdft1P53798 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Fdft1P53798 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Fdft1P53798 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Fdft1P53798 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Fdft1P53798 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Fdft1P53798 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Fdft1P53798 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Fdft1P53798 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Fdft1P53798 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Fdft1P53798 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Fdft1P53798 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Fdft1P53798 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Fdft1P53798 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC14.41□□□□□ -0.1
Fdft1P53798 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Fdft1P53798 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Fdft1P53798 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Fdft1P53798 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Fdft1P53798 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Fdft1P53798 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Fdft1P53798 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Fdft1P53798 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Fdft1P53798 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Fdft1P53798 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Fdft1P53798 Gm8749-201ENSMUST00000117737 331 ntBASIC14.41□□□□□ -0.1
Fdft1P53798 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC14.41□□□□□ -0.1
Fdft1P53798 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC14.41□□□□□ -0.1
Fdft1P53798 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC14.41□□□□□ -0.1
Fdft1P53798 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC14.41□□□□□ -0.1
Fdft1P53798 AC090659.1-201ENSMUST00000224334 768 ntBASIC14.41□□□□□ -0.1
Fdft1P53798 AC164565.1-201ENSMUST00000217520 1484 ntBASIC14.41□□□□□ -0.1
Fdft1P53798 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Fdft1P53798 Gm26513-201ENSMUST00000181802 2489 ntBASIC14.41□□□□□ -0.1
Fdft1P53798 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Fdft1P53798 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Fdft1P53798 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Fdft1P53798 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Fdft1P53798 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Fdft1P53798 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Fdft1P53798 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Fdft1P53798 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Fdft1P53798 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC14.41□□□□□ -0.1
Fdft1P53798 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Fdft1P53798 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC14.41□□□□□ -0.1
Fdft1P53798 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Fdft1P53798 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Fdft1P53798 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Fdft1P53798 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Fdft1P53798 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Fdft1P53798 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Fdft1P53798 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Fdft1P53798 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Fdft1P53798 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Fdft1P53798 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Fdft1P53798 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Fdft1P53798 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Fdft1P53798 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Fdft1P53798 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC14.4□□□□□ -0.1
Fdft1P53798 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Fdft1P53798 Gm44492-201ENSMUST00000197012 141 ntBASIC14.4□□□□□ -0.1
Fdft1P53798 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC14.4□□□□□ -0.1
Fdft1P53798 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Fdft1P53798 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Fdft1P53798 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Fdft1P53798 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Fdft1P53798 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Fdft1P53798 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Fdft1P53798 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Fdft1P53798 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Fdft1P53798 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC14.4□□□□□ -0.1
Fdft1P53798 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Fdft1P53798 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 27.9 ms