Protein–RNA interactions for Protein: P50284

Ltbr, Tumor necrosis factor receptor superfamily member 3, mousemouse

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LtbrP50284 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
LtbrP50284 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
LtbrP50284 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC16.91■□□□□ 0.3
LtbrP50284 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC16.91■□□□□ 0.3
LtbrP50284 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
LtbrP50284 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
LtbrP50284 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
LtbrP50284 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
LtbrP50284 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
LtbrP50284 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
LtbrP50284 Gm12390-201ENSMUST00000117897 397 ntBASIC16.91■□□□□ 0.3
LtbrP50284 Gm6222-201ENSMUST00000120787 396 ntBASIC16.91■□□□□ 0.3
LtbrP50284 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC16.91■□□□□ 0.3
LtbrP50284 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
LtbrP50284 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
LtbrP50284 Gm5479-201ENSMUST00000160578 435 ntBASIC16.91■□□□□ 0.3
LtbrP50284 Ppm1h-208ENSMUST00000162969 811 ntTSL 3 BASIC16.91■□□□□ 0.3
LtbrP50284 AC164567.1-201ENSMUST00000219185 960 ntBASIC16.91■□□□□ 0.3
LtbrP50284 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
LtbrP50284 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
LtbrP50284 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
LtbrP50284 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
LtbrP50284 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
LtbrP50284 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
LtbrP50284 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
LtbrP50284 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
LtbrP50284 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
LtbrP50284 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
LtbrP50284 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
LtbrP50284 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
LtbrP50284 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
LtbrP50284 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
LtbrP50284 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
LtbrP50284 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
LtbrP50284 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
LtbrP50284 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
LtbrP50284 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
LtbrP50284 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
LtbrP50284 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
LtbrP50284 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
LtbrP50284 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
LtbrP50284 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
LtbrP50284 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC16.9■□□□□ 0.3
LtbrP50284 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC16.9■□□□□ 0.3
LtbrP50284 Gm27206-201ENSMUST00000154038 979 ntTSL 5 BASIC16.9■□□□□ 0.3
LtbrP50284 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
LtbrP50284 Gm8835-201ENSMUST00000173096 1169 ntBASIC16.9■□□□□ 0.3
LtbrP50284 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC16.9■□□□□ 0.3
LtbrP50284 Mir3102-201ENSMUST00000175555 104 ntBASIC16.9■□□□□ 0.3
LtbrP50284 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
LtbrP50284 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
LtbrP50284 Gm39317-201ENSMUST00000213360 1138 ntTSL 5 BASIC16.9■□□□□ 0.3
LtbrP50284 AC134328.1-201ENSMUST00000222693 667 ntTSL 2 BASIC16.9■□□□□ 0.3
LtbrP50284 AC154171.1-201ENSMUST00000224610 643 ntBASIC16.9■□□□□ 0.3
LtbrP50284 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
LtbrP50284 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
LtbrP50284 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
LtbrP50284 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
LtbrP50284 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC16.9■□□□□ 0.3
LtbrP50284 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
LtbrP50284 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
LtbrP50284 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
LtbrP50284 Gm43195-201ENSMUST00000200614 2332 ntBASIC16.9■□□□□ 0.3
LtbrP50284 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC16.9■□□□□ 0.3
LtbrP50284 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
LtbrP50284 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
LtbrP50284 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
LtbrP50284 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
LtbrP50284 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
LtbrP50284 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
LtbrP50284 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC16.89■□□□□ 0.29
LtbrP50284 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC16.89■□□□□ 0.29
LtbrP50284 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC16.89■□□□□ 0.29
LtbrP50284 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
LtbrP50284 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC16.89■□□□□ 0.29
LtbrP50284 Thoc7-209ENSMUST00000225325 765 ntBASIC16.89■□□□□ 0.29
LtbrP50284 AC150560.1-201ENSMUST00000227731 1187 ntBASIC16.89■□□□□ 0.29
LtbrP50284 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
LtbrP50284 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC16.89■□□□□ 0.29
LtbrP50284 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC16.89■□□□□ 0.29
LtbrP50284 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
LtbrP50284 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
LtbrP50284 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
LtbrP50284 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
LtbrP50284 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
LtbrP50284 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
LtbrP50284 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
LtbrP50284 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
LtbrP50284 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
LtbrP50284 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
LtbrP50284 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
LtbrP50284 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
LtbrP50284 Gm15198-201ENSMUST00000117283 177 ntBASIC16.88■□□□□ 0.29
LtbrP50284 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC16.88■□□□□ 0.29
LtbrP50284 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
LtbrP50284 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
LtbrP50284 Gm42660-201ENSMUST00000197733 947 ntBASIC16.88■□□□□ 0.29
LtbrP50284 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
LtbrP50284 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
LtbrP50284 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms