Protein–RNA interactions for Protein: P48381

Rfx3, Transcription factor RFX3, mousemouse

Predictions only

Length 749 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx3P48381 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rfx3P48381 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rfx3P48381 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Rfx3P48381 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rfx3P48381 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rfx3P48381 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rfx3P48381 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rfx3P48381 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC13.04□□□□□ -0.32
Rfx3P48381 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rfx3P48381 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Rfx3P48381 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rfx3P48381 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rfx3P48381 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rfx3P48381 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rfx3P48381 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rfx3P48381 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC13.04□□□□□ -0.32
Rfx3P48381 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Rfx3P48381 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC13.04□□□□□ -0.32
Rfx3P48381 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC13.04□□□□□ -0.32
Rfx3P48381 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Rfx3P48381 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC13.04□□□□□ -0.32
Rfx3P48381 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Rfx3P48381 Gm2272-201ENSMUST00000194903 582 ntBASIC13.04□□□□□ -0.32
Rfx3P48381 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rfx3P48381 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC13.04□□□□□ -0.32
Rfx3P48381 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC13.04□□□□□ -0.32
Rfx3P48381 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Rfx3P48381 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC13.04□□□□□ -0.32
Rfx3P48381 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Rfx3P48381 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rfx3P48381 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Rfx3P48381 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rfx3P48381 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rfx3P48381 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rfx3P48381 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Rfx3P48381 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rfx3P48381 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC13.04□□□□□ -0.32
Rfx3P48381 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rfx3P48381 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rfx3P48381 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC13.03□□□□□ -0.32
Rfx3P48381 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rfx3P48381 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC13.03□□□□□ -0.32
Rfx3P48381 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rfx3P48381 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Rfx3P48381 Gm45779-201ENSMUST00000212189 4064 ntBASIC13.03□□□□□ -0.32
Rfx3P48381 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rfx3P48381 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rfx3P48381 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Rfx3P48381 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Rfx3P48381 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rfx3P48381 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rfx3P48381 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rfx3P48381 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Rfx3P48381 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC13.03□□□□□ -0.32
Rfx3P48381 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC13.03□□□□□ -0.32
Rfx3P48381 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rfx3P48381 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC13.03□□□□□ -0.32
Rfx3P48381 Mir7036b-201ENSMUST00000184791 63 ntBASIC13.03□□□□□ -0.32
Rfx3P48381 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rfx3P48381 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Rfx3P48381 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Rfx3P48381 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rfx3P48381 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Rfx3P48381 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rfx3P48381 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rfx3P48381 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rfx3P48381 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC13.03□□□□□ -0.32
Rfx3P48381 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Rfx3P48381 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Rfx3P48381 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Rfx3P48381 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rfx3P48381 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rfx3P48381 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Rfx3P48381 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.32
Rfx3P48381 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Rfx3P48381 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
Rfx3P48381 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Rfx3P48381 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
Rfx3P48381 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Rfx3P48381 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.32
Rfx3P48381 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Rfx3P48381 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Rfx3P48381 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Rfx3P48381 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Rfx3P48381 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC13.02□□□□□ -0.33
Rfx3P48381 Trav13-3-201ENSMUST00000117226 336 ntBASIC13.02□□□□□ -0.33
Rfx3P48381 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC13.02□□□□□ -0.33
Rfx3P48381 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC13.02□□□□□ -0.33
Rfx3P48381 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC13.02□□□□□ -0.33
Rfx3P48381 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Rfx3P48381 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Rfx3P48381 AC154222.1-201ENSMUST00000223882 475 ntBASIC13.02□□□□□ -0.33
Rfx3P48381 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Rfx3P48381 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Rfx3P48381 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Rfx3P48381 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Rfx3P48381 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC13.02□□□□□ -0.33
Rfx3P48381 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Rfx3P48381 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Rfx3P48381 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 53.4 ms