Protein–RNA interactions for Protein: P43688

Nkx2-6, Homeobox protein Nkx-2.6, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-6P43688 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nkx2-6P43688 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Nkx2-6P43688 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nkx2-6P43688 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC13.65□□□□□ -0.22
Nkx2-6P43688 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nkx2-6P43688 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nkx2-6P43688 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC13.65□□□□□ -0.23
Nkx2-6P43688 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Nkx2-6P43688 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Nkx2-6P43688 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC13.64□□□□□ -0.23
Nkx2-6P43688 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Nkx2-6P43688 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Nkx2-6P43688 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC13.64□□□□□ -0.23
Nkx2-6P43688 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC13.64□□□□□ -0.23
Nkx2-6P43688 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Nkx2-6P43688 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Nkx2-6P43688 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Nkx2-6P43688 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Nkx2-6P43688 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Nkx2-6P43688 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Nkx2-6P43688 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Nkx2-6P43688 Gm12134-201ENSMUST00000122109 520 ntBASIC13.64□□□□□ -0.23
Nkx2-6P43688 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Nkx2-6P43688 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Nkx2-6P43688 Hist1h2al-201ENSMUST00000091708 339 ntBASIC13.64□□□□□ -0.23
Nkx2-6P43688 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Nkx2-6P43688 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC13.64□□□□□ -0.23
Nkx2-6P43688 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Nkx2-6P43688 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC13.64□□□□□ -0.23
Nkx2-6P43688 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Nkx2-6P43688 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Nkx2-6P43688 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Nkx2-6P43688 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Nkx2-6P43688 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Nkx2-6P43688 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC13.64□□□□□ -0.23
Nkx2-6P43688 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC13.64□□□□□ -0.23
Nkx2-6P43688 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC13.64□□□□□ -0.23
Nkx2-6P43688 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Nkx2-6P43688 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Nkx2-6P43688 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Nkx2-6P43688 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Nkx2-6P43688 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nkx2-6P43688 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nkx2-6P43688 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nkx2-6P43688 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nkx2-6P43688 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nkx2-6P43688 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nkx2-6P43688 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nkx2-6P43688 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nkx2-6P43688 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nkx2-6P43688 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Nkx2-6P43688 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Nkx2-6P43688 Gm4204-201ENSMUST00000110798 1231 ntBASIC13.63□□□□□ -0.23
Nkx2-6P43688 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Nkx2-6P43688 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nkx2-6P43688 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC13.63□□□□□ -0.23
Nkx2-6P43688 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nkx2-6P43688 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Nkx2-6P43688 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Nkx2-6P43688 Gm37230-201ENSMUST00000194491 818 ntBASIC13.63□□□□□ -0.23
Nkx2-6P43688 Gm43703-201ENSMUST00000200523 763 ntBASIC13.63□□□□□ -0.23
Nkx2-6P43688 AC135669.1-201ENSMUST00000213585 412 ntBASIC13.63□□□□□ -0.23
Nkx2-6P43688 AC124732.1-201ENSMUST00000221551 910 ntBASIC13.63□□□□□ -0.23
Nkx2-6P43688 AC123645.1-201ENSMUST00000228469 605 ntBASIC13.63□□□□□ -0.23
Nkx2-6P43688 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nkx2-6P43688 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nkx2-6P43688 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Nkx2-6P43688 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nkx2-6P43688 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nkx2-6P43688 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Nkx2-6P43688 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC13.63□□□□□ -0.23
Nkx2-6P43688 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nkx2-6P43688 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Nkx2-6P43688 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nkx2-6P43688 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nkx2-6P43688 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nkx2-6P43688 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Nkx2-6P43688 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Nkx2-6P43688 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Nkx2-6P43688 Syt7-205ENSMUST00000224135 1557 ntBASIC13.62□□□□□ -0.23
Nkx2-6P43688 Camk2g-217ENSMUST00000226630 1937 ntBASIC13.62□□□□□ -0.23
Nkx2-6P43688 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Nkx2-6P43688 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Nkx2-6P43688 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Nkx2-6P43688 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Nkx2-6P43688 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Nkx2-6P43688 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Nkx2-6P43688 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Nkx2-6P43688 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Nkx2-6P43688 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC13.62□□□□□ -0.23
Nkx2-6P43688 Mir1897-201ENSMUST00000122581 272 ntBASIC13.62□□□□□ -0.23
Nkx2-6P43688 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC13.62□□□□□ -0.23
Nkx2-6P43688 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Nkx2-6P43688 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Nkx2-6P43688 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Nkx2-6P43688 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Nkx2-6P43688 Gm29667-201ENSMUST00000190817 490 ntBASIC13.62□□□□□ -0.23
Nkx2-6P43688 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Nkx2-6P43688 Gm44855-201ENSMUST00000205725 362 ntBASIC13.62□□□□□ -0.23
Nkx2-6P43688 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 26 ms