Protein–RNA interactions for Protein: P43241

Cdx2, Homeobox protein CDX-2, mousemouse

Predictions only

Length 311 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx2P43241 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cdx2P43241 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cdx2P43241 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Cdx2P43241 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cdx2P43241 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Cdx2P43241 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.23
Cdx2P43241 AC114008.2-201ENSMUST00000227699 1347 ntBASIC13.64□□□□□ -0.23
Cdx2P43241 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Cdx2P43241 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cdx2P43241 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Cdx2P43241 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cdx2P43241 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cdx2P43241 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cdx2P43241 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cdx2P43241 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Cdx2P43241 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cdx2P43241 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cdx2P43241 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cdx2P43241 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cdx2P43241 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cdx2P43241 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cdx2P43241 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cdx2P43241 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cdx2P43241 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC13.64□□□□□ -0.23
Cdx2P43241 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cdx2P43241 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cdx2P43241 Gm15957-201ENSMUST00000118893 974 ntBASIC13.64□□□□□ -0.23
Cdx2P43241 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Cdx2P43241 Mir1982-201ENSMUST00000157368 74 ntBASIC13.64□□□□□ -0.23
Cdx2P43241 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC13.64□□□□□ -0.23
Cdx2P43241 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC13.64□□□□□ -0.23
Cdx2P43241 Gm4804-201ENSMUST00000182234 999 ntBASIC13.64□□□□□ -0.23
Cdx2P43241 AC166349.1-201ENSMUST00000220866 695 ntBASIC13.64□□□□□ -0.23
Cdx2P43241 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Cdx2P43241 Mettl26-201ENSMUST00000026827 817 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cdx2P43241 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cdx2P43241 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cdx2P43241 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Cdx2P43241 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cdx2P43241 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Cdx2P43241 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cdx2P43241 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cdx2P43241 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cdx2P43241 Gm44616-201ENSMUST00000206417 1732 ntBASIC13.64□□□□□ -0.23
Cdx2P43241 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cdx2P43241 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Cdx2P43241 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC13.64□□□□□ -0.23
Cdx2P43241 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cdx2P43241 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cdx2P43241 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cdx2P43241 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cdx2P43241 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Cdx2P43241 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cdx2P43241 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Cdx2P43241 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC13.63□□□□□ -0.23
Cdx2P43241 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cdx2P43241 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cdx2P43241 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cdx2P43241 Sybu-209ENSMUST00000228639 4113 ntBASIC13.63□□□□□ -0.23
Cdx2P43241 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cdx2P43241 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Cdx2P43241 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.23
Cdx2P43241 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Cdx2P43241 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cdx2P43241 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Cdx2P43241 Mir6420-201ENSMUST00000185032 102 ntBASIC13.63□□□□□ -0.23
Cdx2P43241 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC13.63□□□□□ -0.23
Cdx2P43241 Gm44799-201ENSMUST00000207639 1202 ntBASIC13.63□□□□□ -0.23
Cdx2P43241 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cdx2P43241 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
Cdx2P43241 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cdx2P43241 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC13.63□□□□□ -0.23
Cdx2P43241 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Cdx2P43241 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Cdx2P43241 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cdx2P43241 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cdx2P43241 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cdx2P43241 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Cdx2P43241 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC13.63□□□□□ -0.23
Cdx2P43241 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cdx2P43241 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cdx2P43241 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cdx2P43241 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Cdx2P43241 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cdx2P43241 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cdx2P43241 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Cdx2P43241 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Cdx2P43241 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cdx2P43241 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC13.62□□□□□ -0.23
Cdx2P43241 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Cdx2P43241 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC13.62□□□□□ -0.23
Cdx2P43241 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC13.62□□□□□ -0.23
Cdx2P43241 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cdx2P43241 Gm6244-201ENSMUST00000178732 841 ntBASIC13.62□□□□□ -0.23
Cdx2P43241 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Cdx2P43241 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Cdx2P43241 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Cdx2P43241 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Cdx2P43241 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC13.62□□□□□ -0.23
Cdx2P43241 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC13.62□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 48.7 ms