Protein–RNA interactions for Protein: P35951

Ldlr, Low-density lipoprotein receptor, mousemouse

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LdlrP35951 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
LdlrP35951 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
LdlrP35951 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
LdlrP35951 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
LdlrP35951 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
LdlrP35951 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
LdlrP35951 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC14.36□□□□□ -0.11
LdlrP35951 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
LdlrP35951 Gm14701-201ENSMUST00000117156 348 ntBASIC14.36□□□□□ -0.11
LdlrP35951 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
LdlrP35951 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
LdlrP35951 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC14.36□□□□□ -0.11
LdlrP35951 AC159295.1-201ENSMUST00000225326 940 ntBASIC14.36□□□□□ -0.11
LdlrP35951 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC14.36□□□□□ -0.11
LdlrP35951 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
LdlrP35951 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
LdlrP35951 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
LdlrP35951 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
LdlrP35951 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
LdlrP35951 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
LdlrP35951 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
LdlrP35951 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
LdlrP35951 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
LdlrP35951 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
LdlrP35951 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
LdlrP35951 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
LdlrP35951 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC14.36□□□□□ -0.11
LdlrP35951 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
LdlrP35951 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
LdlrP35951 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
LdlrP35951 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
LdlrP35951 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC14.35□□□□□ -0.11
LdlrP35951 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
LdlrP35951 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
LdlrP35951 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
LdlrP35951 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
LdlrP35951 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC14.35□□□□□ -0.11
LdlrP35951 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
LdlrP35951 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
LdlrP35951 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
LdlrP35951 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC14.35□□□□□ -0.11
LdlrP35951 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
LdlrP35951 AC159114.1-201ENSMUST00000220349 266 ntBASIC14.35□□□□□ -0.11
LdlrP35951 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
LdlrP35951 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
LdlrP35951 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC14.35□□□□□ -0.11
LdlrP35951 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC14.35□□□□□ -0.11
LdlrP35951 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
LdlrP35951 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
LdlrP35951 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
LdlrP35951 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
LdlrP35951 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
LdlrP35951 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
LdlrP35951 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
LdlrP35951 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
LdlrP35951 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
LdlrP35951 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
LdlrP35951 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
LdlrP35951 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
LdlrP35951 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
LdlrP35951 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
LdlrP35951 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
LdlrP35951 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
LdlrP35951 Gm26513-201ENSMUST00000181802 2489 ntBASIC14.34□□□□□ -0.11
LdlrP35951 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
LdlrP35951 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
LdlrP35951 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
LdlrP35951 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
LdlrP35951 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
LdlrP35951 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC14.34□□□□□ -0.11
LdlrP35951 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
LdlrP35951 Gm13464-201ENSMUST00000119418 935 ntBASIC14.34□□□□□ -0.11
LdlrP35951 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
LdlrP35951 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
LdlrP35951 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
LdlrP35951 Gm7787-201ENSMUST00000216858 688 ntBASIC14.34□□□□□ -0.11
LdlrP35951 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
LdlrP35951 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
LdlrP35951 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
LdlrP35951 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
LdlrP35951 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
LdlrP35951 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
LdlrP35951 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
LdlrP35951 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC14.34□□□□□ -0.11
LdlrP35951 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
LdlrP35951 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
LdlrP35951 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
LdlrP35951 Best4-ps-201ENSMUST00000129783 1380 ntBASIC14.34□□□□□ -0.11
LdlrP35951 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
LdlrP35951 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
LdlrP35951 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC14.33□□□□□ -0.11
LdlrP35951 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
LdlrP35951 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
LdlrP35951 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
LdlrP35951 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
LdlrP35951 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
LdlrP35951 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC14.33□□□□□ -0.12
LdlrP35951 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
LdlrP35951 Gm17271-201ENSMUST00000165535 355 ntBASIC14.33□□□□□ -0.12
LdlrP35951 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms