Protein–RNA interactions for Protein: P31240

Pdgfb, Platelet-derived growth factor subunit B, mousemouse

Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PdgfbP31240 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
PdgfbP31240 Svip-203ENSMUST00000209193 487 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
PdgfbP31240 Gm5425-201ENSMUST00000214125 459 ntBASIC14.34□□□□□ -0.11
PdgfbP31240 Gm39318-201ENSMUST00000214606 1118 ntTSL 3 BASIC14.34□□□□□ -0.11
PdgfbP31240 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
PdgfbP31240 Rrp36-201ENSMUST00000024766 1195 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PdgfbP31240 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
PdgfbP31240 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
PdgfbP31240 Prob1-201ENSMUST00000097619 3021 ntBASIC14.34□□□□□ -0.11
PdgfbP31240 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
PdgfbP31240 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC14.34□□□□□ -0.11
PdgfbP31240 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PdgfbP31240 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PdgfbP31240 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PdgfbP31240 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PdgfbP31240 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
PdgfbP31240 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PdgfbP31240 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
PdgfbP31240 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PdgfbP31240 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
PdgfbP31240 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
PdgfbP31240 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
PdgfbP31240 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
PdgfbP31240 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
PdgfbP31240 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
PdgfbP31240 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
PdgfbP31240 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
PdgfbP31240 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
PdgfbP31240 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC14.33□□□□□ -0.12
PdgfbP31240 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC14.33□□□□□ -0.12
PdgfbP31240 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
PdgfbP31240 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC14.33□□□□□ -0.12
PdgfbP31240 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC14.33□□□□□ -0.12
PdgfbP31240 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC14.33□□□□□ -0.12
PdgfbP31240 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
PdgfbP31240 Gm27514-201ENSMUST00000183692 110 ntBASIC14.33□□□□□ -0.12
PdgfbP31240 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC14.33□□□□□ -0.12
PdgfbP31240 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
PdgfbP31240 Gm20083-202ENSMUST00000206663 1008 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
PdgfbP31240 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC14.33□□□□□ -0.12
PdgfbP31240 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
PdgfbP31240 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
PdgfbP31240 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
PdgfbP31240 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
PdgfbP31240 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
PdgfbP31240 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
PdgfbP31240 Gm13050-201ENSMUST00000122149 1345 ntBASIC14.33□□□□□ -0.12
PdgfbP31240 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
PdgfbP31240 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
PdgfbP31240 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
PdgfbP31240 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
PdgfbP31240 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC14.33□□□□□ -0.12
PdgfbP31240 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
PdgfbP31240 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
PdgfbP31240 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PdgfbP31240 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
PdgfbP31240 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PdgfbP31240 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PdgfbP31240 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PdgfbP31240 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
PdgfbP31240 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
PdgfbP31240 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC14.32□□□□□ -0.12
PdgfbP31240 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC14.32□□□□□ -0.12
PdgfbP31240 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PdgfbP31240 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
PdgfbP31240 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC14.32□□□□□ -0.12
PdgfbP31240 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PdgfbP31240 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PdgfbP31240 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
PdgfbP31240 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PdgfbP31240 Tmem254b-202ENSMUST00000100806 1108 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
PdgfbP31240 Tmem254a-201ENSMUST00000100811 1108 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
PdgfbP31240 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PdgfbP31240 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PdgfbP31240 Rhox2g-201ENSMUST00000115169 795 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PdgfbP31240 Gm14723-201ENSMUST00000118686 215 ntBASIC14.32□□□□□ -0.12
PdgfbP31240 Gm12416-201ENSMUST00000120911 1008 ntBASIC14.32□□□□□ -0.12
PdgfbP31240 Gm27243-201ENSMUST00000183964 521 ntBASIC14.32□□□□□ -0.12
PdgfbP31240 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
PdgfbP31240 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PdgfbP31240 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC14.32□□□□□ -0.12
PdgfbP31240 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
PdgfbP31240 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
PdgfbP31240 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PdgfbP31240 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
PdgfbP31240 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PdgfbP31240 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PdgfbP31240 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
PdgfbP31240 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PdgfbP31240 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
PdgfbP31240 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
PdgfbP31240 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
PdgfbP31240 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
PdgfbP31240 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
PdgfbP31240 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
PdgfbP31240 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC14.31□□□□□ -0.12
PdgfbP31240 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
PdgfbP31240 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
PdgfbP31240 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
PdgfbP31240 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 67.9 ms