Protein–RNA interactions for Protein: P29533

Vcam1, Vascular cell adhesion protein 1, mousemouse

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcam1P29533 Gm16425-201ENSMUST00000118143 3130 ntBASIC16.5■□□□□ 0.23
Vcam1P29533 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
Vcam1P29533 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Vcam1P29533 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Vcam1P29533 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Vcam1P29533 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Vcam1P29533 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Vcam1P29533 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Vcam1P29533 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
Vcam1P29533 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
Vcam1P29533 AC154527.2-201ENSMUST00000225256 1466 ntBASIC16.49■□□□□ 0.23
Vcam1P29533 Ssr1-204ENSMUST00000225319 1610 ntBASIC16.49■□□□□ 0.23
Vcam1P29533 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Vcam1P29533 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Vcam1P29533 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Vcam1P29533 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC16.49■□□□□ 0.23
Vcam1P29533 Gm9109-201ENSMUST00000120254 1405 ntBASIC16.49■□□□□ 0.23
Vcam1P29533 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC16.49■□□□□ 0.23
Vcam1P29533 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Vcam1P29533 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
Vcam1P29533 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC16.49■□□□□ 0.23
Vcam1P29533 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
Vcam1P29533 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC16.49■□□□□ 0.23
Vcam1P29533 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Vcam1P29533 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Vcam1P29533 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
Vcam1P29533 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Vcam1P29533 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Vcam1P29533 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
Vcam1P29533 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Vcam1P29533 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Vcam1P29533 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Vcam1P29533 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Vcam1P29533 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Vcam1P29533 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
Vcam1P29533 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Vcam1P29533 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Vcam1P29533 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Vcam1P29533 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Vcam1P29533 AC154412.1-201ENSMUST00000226540 2786 ntBASIC16.49■□□□□ 0.23
Vcam1P29533 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Vcam1P29533 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Vcam1P29533 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Vcam1P29533 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Vcam1P29533 Gm11478-201ENSMUST00000117851 599 ntBASIC16.48■□□□□ 0.23
Vcam1P29533 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC16.48■□□□□ 0.23
Vcam1P29533 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC16.48■□□□□ 0.23
Vcam1P29533 Gm11918-201ENSMUST00000121660 179 ntBASIC16.48■□□□□ 0.23
Vcam1P29533 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Vcam1P29533 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Vcam1P29533 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
Vcam1P29533 Gm7558-201ENSMUST00000193221 1165 ntBASIC16.48■□□□□ 0.23
Vcam1P29533 Gm43438-201ENSMUST00000198133 379 ntBASIC16.48■□□□□ 0.23
Vcam1P29533 Gm18027-201ENSMUST00000218947 619 ntBASIC16.48■□□□□ 0.23
Vcam1P29533 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
Vcam1P29533 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
Vcam1P29533 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Vcam1P29533 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Vcam1P29533 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Vcam1P29533 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Vcam1P29533 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Vcam1P29533 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC16.48■□□□□ 0.23
Vcam1P29533 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC16.48■□□□□ 0.23
Vcam1P29533 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
Vcam1P29533 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Vcam1P29533 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
Vcam1P29533 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Vcam1P29533 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
Vcam1P29533 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Vcam1P29533 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
Vcam1P29533 Gm45630-201ENSMUST00000210243 1911 ntBASIC16.47■□□□□ 0.23
Vcam1P29533 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Vcam1P29533 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
Vcam1P29533 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Vcam1P29533 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Vcam1P29533 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
Vcam1P29533 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Vcam1P29533 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Vcam1P29533 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Vcam1P29533 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Vcam1P29533 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
Vcam1P29533 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Vcam1P29533 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Vcam1P29533 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
Vcam1P29533 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Vcam1P29533 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Vcam1P29533 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Vcam1P29533 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC16.46■□□□□ 0.23
Vcam1P29533 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Vcam1P29533 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
Vcam1P29533 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Vcam1P29533 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Vcam1P29533 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Vcam1P29533 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
Vcam1P29533 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC16.46■□□□□ 0.23
Vcam1P29533 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Vcam1P29533 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Vcam1P29533 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Vcam1P29533 Gm14127-201ENSMUST00000117906 678 ntBASIC16.46■□□□□ 0.23
Vcam1P29533 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 42.2 ms