Protein–RNA interactions for Protein: P23198

Cbx3, Chromobox protein homolog 3, mousemouse

Known RBP Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cbx3P23198 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC13.17□□□□□ -0.3
Cbx3P23198 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Cbx3P23198 Slc26a6-201ENSMUST00000098376 2402 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Cbx3P23198 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cbx3P23198 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cbx3P23198 Gm31518-201ENSMUST00000211925 2548 ntTSL 5 BASIC13.16□□□□□ -0.3
Cbx3P23198 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cbx3P23198 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cbx3P23198 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Cbx3P23198 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC13.16□□□□□ -0.3
Cbx3P23198 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Cbx3P23198 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cbx3P23198 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC13.16□□□□□ -0.3
Cbx3P23198 Gm8668-201ENSMUST00000120559 1447 ntBASIC13.16□□□□□ -0.3
Cbx3P23198 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cbx3P23198 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cbx3P23198 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Cbx3P23198 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cbx3P23198 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cbx3P23198 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cbx3P23198 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Cbx3P23198 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Cbx3P23198 Gm37722-201ENSMUST00000193757 208 ntBASIC13.16□□□□□ -0.3
Cbx3P23198 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Cbx3P23198 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC13.16□□□□□ -0.3
Cbx3P23198 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cbx3P23198 Ap1g2-201ENSMUST00000036041 2673 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cbx3P23198 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC13.16□□□□□ -0.3
Cbx3P23198 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cbx3P23198 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cbx3P23198 Syde2-203ENSMUST00000200546 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cbx3P23198 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC13.16□□□□□ -0.3
Cbx3P23198 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cbx3P23198 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cbx3P23198 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Cbx3P23198 Gm7002-201ENSMUST00000221386 2165 ntBASIC13.15□□□□□ -0.3
Cbx3P23198 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cbx3P23198 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC13.15□□□□□ -0.3
Cbx3P23198 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cbx3P23198 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cbx3P23198 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC13.15□□□□□ -0.3
Cbx3P23198 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Cbx3P23198 Pop4-201ENSMUST00000032585 2113 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cbx3P23198 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cbx3P23198 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cbx3P23198 Gm43134-201ENSMUST00000199434 1886 ntBASIC13.15□□□□□ -0.3
Cbx3P23198 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Cbx3P23198 Tnip1-204ENSMUST00000108885 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cbx3P23198 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cbx3P23198 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Cbx3P23198 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Cbx3P23198 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Cbx3P23198 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cbx3P23198 Gm10013-201ENSMUST00000106074 672 ntBASIC13.15□□□□□ -0.3
Cbx3P23198 Gm15565-201ENSMUST00000118890 427 ntBASIC13.15□□□□□ -0.3
Cbx3P23198 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cbx3P23198 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Cbx3P23198 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Cbx3P23198 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC13.15□□□□□ -0.3
Cbx3P23198 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cbx3P23198 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC13.15□□□□□ -0.3
Cbx3P23198 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Cbx3P23198 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Cbx3P23198 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cbx3P23198 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cbx3P23198 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Cbx3P23198 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cbx3P23198 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
Cbx3P23198 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cbx3P23198 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cbx3P23198 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cbx3P23198 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cbx3P23198 Lnx1-201ENSMUST00000039744 2727 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Cbx3P23198 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cbx3P23198 Nudt18-202ENSMUST00000228554 3619 ntBASIC13.15□□□□□ -0.3
Cbx3P23198 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cbx3P23198 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Cbx3P23198 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cbx3P23198 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.31
Cbx3P23198 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC13.15□□□□□ -0.31
Cbx3P23198 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Cbx3P23198 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.31
Cbx3P23198 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Cbx3P23198 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC13.14□□□□□ -0.31
Cbx3P23198 Rgs6-222ENSMUST00000202210 3069 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Cbx3P23198 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC13.14□□□□□ -0.31
Cbx3P23198 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Cbx3P23198 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cbx3P23198 Gm44981-201ENSMUST00000205549 1943 ntBASIC13.14□□□□□ -0.31
Cbx3P23198 Upk3b-201ENSMUST00000062606 3530 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cbx3P23198 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC13.14□□□□□ -0.31
Cbx3P23198 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Cbx3P23198 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cbx3P23198 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC13.14□□□□□ -0.31
Cbx3P23198 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC13.14□□□□□ -0.31
Cbx3P23198 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC13.14□□□□□ -0.31
Cbx3P23198 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
Cbx3P23198 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Cbx3P23198 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cbx3P23198 Dpp9-201ENSMUST00000038794 3374 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 41 ms