Protein–RNA interactions for Protein: P20664

Prim1, DNA primase small subunit, mousemouse

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prim1P20664 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Prim1P20664 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Prim1P20664 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Prim1P20664 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Prim1P20664 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Prim1P20664 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Prim1P20664 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Prim1P20664 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Prim1P20664 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Prim1P20664 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Prim1P20664 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Prim1P20664 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC18.31■□□□□ 0.52
Prim1P20664 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Prim1P20664 Gm15460-201ENSMUST00000118147 391 ntBASIC18.31■□□□□ 0.52
Prim1P20664 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Prim1P20664 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC18.31■□□□□ 0.52
Prim1P20664 Gm33320-201ENSMUST00000192232 530 ntBASIC18.31■□□□□ 0.52
Prim1P20664 Olfr1233-203ENSMUST00000215469 1205 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Prim1P20664 Olfr1233-204ENSMUST00000216561 1192 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Prim1P20664 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Prim1P20664 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Prim1P20664 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC18.31■□□□□ 0.52
Prim1P20664 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Prim1P20664 Gm14451-201ENSMUST00000121581 1542 ntBASIC18.31■□□□□ 0.52
Prim1P20664 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Prim1P20664 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Prim1P20664 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Prim1P20664 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Prim1P20664 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC18.31■□□□□ 0.52
Prim1P20664 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Prim1P20664 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Prim1P20664 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Prim1P20664 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Prim1P20664 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Prim1P20664 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Prim1P20664 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC18.3■□□□□ 0.52
Prim1P20664 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Prim1P20664 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Prim1P20664 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Prim1P20664 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Prim1P20664 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC18.3■□□□□ 0.52
Prim1P20664 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC18.3■□□□□ 0.52
Prim1P20664 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC18.3■□□□□ 0.52
Prim1P20664 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC18.3■□□□□ 0.52
Prim1P20664 Gm5745-201ENSMUST00000183748 313 ntBASIC18.3■□□□□ 0.52
Prim1P20664 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Prim1P20664 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Prim1P20664 AC154846.1-201ENSMUST00000226278 862 ntBASIC18.3■□□□□ 0.52
Prim1P20664 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Prim1P20664 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Prim1P20664 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC18.3■□□□□ 0.52
Prim1P20664 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Prim1P20664 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Prim1P20664 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Prim1P20664 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC18.3■□□□□ 0.52
Prim1P20664 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Prim1P20664 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC18.3■□□□□ 0.52
Prim1P20664 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Prim1P20664 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Prim1P20664 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Prim1P20664 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Prim1P20664 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Prim1P20664 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Prim1P20664 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Prim1P20664 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Prim1P20664 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Prim1P20664 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Prim1P20664 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Prim1P20664 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Prim1P20664 Ldb3-207ENSMUST00000227819 1499 ntBASIC18.29■□□□□ 0.52
Prim1P20664 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Prim1P20664 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Prim1P20664 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Prim1P20664 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Prim1P20664 Gm15957-201ENSMUST00000118893 974 ntBASIC18.29■□□□□ 0.52
Prim1P20664 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Prim1P20664 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC18.29■□□□□ 0.52
Prim1P20664 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Prim1P20664 Gm10766-202ENSMUST00000194123 606 ntBASIC18.29■□□□□ 0.52
Prim1P20664 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC18.29■□□□□ 0.52
Prim1P20664 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Prim1P20664 AC134328.1-201ENSMUST00000222693 667 ntTSL 2 BASIC18.29■□□□□ 0.52
Prim1P20664 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Prim1P20664 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Prim1P20664 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Prim1P20664 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Prim1P20664 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Prim1P20664 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Prim1P20664 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC18.29■□□□□ 0.52
Prim1P20664 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Prim1P20664 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Prim1P20664 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Prim1P20664 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Prim1P20664 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Prim1P20664 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC18.28■□□□□ 0.52
Prim1P20664 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
Prim1P20664 Gm11424-201ENSMUST00000121929 829 ntBASIC18.28■□□□□ 0.52
Prim1P20664 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC18.28■□□□□ 0.52
Prim1P20664 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC18.28■□□□□ 0.52
Prim1P20664 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 63.7 ms