Protein–RNA interactions for Protein: P20033

Pdgfa, Platelet-derived growth factor subunit A, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PdgfaP20033 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
PdgfaP20033 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC14.38□□□□□ -0.11
PdgfaP20033 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
PdgfaP20033 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
PdgfaP20033 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
PdgfaP20033 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
PdgfaP20033 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
PdgfaP20033 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC14.38□□□□□ -0.11
PdgfaP20033 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
PdgfaP20033 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
PdgfaP20033 Gm43570-201ENSMUST00000199951 3688 ntBASIC14.37□□□□□ -0.11
PdgfaP20033 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PdgfaP20033 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
PdgfaP20033 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
PdgfaP20033 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
PdgfaP20033 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
PdgfaP20033 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
PdgfaP20033 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC14.37□□□□□ -0.11
PdgfaP20033 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC14.37□□□□□ -0.11
PdgfaP20033 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC14.37□□□□□ -0.11
PdgfaP20033 AC117588.1-201ENSMUST00000228510 999 ntBASIC14.37□□□□□ -0.11
PdgfaP20033 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC14.37□□□□□ -0.11
PdgfaP20033 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PdgfaP20033 Gm18244-201ENSMUST00000219747 1566 ntBASIC14.37□□□□□ -0.11
PdgfaP20033 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PdgfaP20033 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PdgfaP20033 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
PdgfaP20033 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
PdgfaP20033 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC14.37□□□□□ -0.11
PdgfaP20033 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PdgfaP20033 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC14.37□□□□□ -0.11
PdgfaP20033 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PdgfaP20033 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC14.37□□□□□ -0.11
PdgfaP20033 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PdgfaP20033 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
PdgfaP20033 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
PdgfaP20033 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PdgfaP20033 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
PdgfaP20033 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
PdgfaP20033 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
PdgfaP20033 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PdgfaP20033 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PdgfaP20033 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
PdgfaP20033 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
PdgfaP20033 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PdgfaP20033 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
PdgfaP20033 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
PdgfaP20033 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
PdgfaP20033 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PdgfaP20033 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PdgfaP20033 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
PdgfaP20033 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PdgfaP20033 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
PdgfaP20033 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
PdgfaP20033 Gm4899-201ENSMUST00000178708 719 ntBASIC14.36□□□□□ -0.11
PdgfaP20033 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PdgfaP20033 Gm27300-201ENSMUST00000184085 97 ntBASIC14.36□□□□□ -0.11
PdgfaP20033 Gm27335-201ENSMUST00000184758 97 ntBASIC14.36□□□□□ -0.11
PdgfaP20033 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC14.36□□□□□ -0.11
PdgfaP20033 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC14.36□□□□□ -0.11
PdgfaP20033 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PdgfaP20033 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
PdgfaP20033 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC14.36□□□□□ -0.11
PdgfaP20033 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PdgfaP20033 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
PdgfaP20033 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
PdgfaP20033 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
PdgfaP20033 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC14.36□□□□□ -0.11
PdgfaP20033 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PdgfaP20033 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PdgfaP20033 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
PdgfaP20033 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC14.36□□□□□ -0.11
PdgfaP20033 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
PdgfaP20033 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
PdgfaP20033 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PdgfaP20033 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
PdgfaP20033 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
PdgfaP20033 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
PdgfaP20033 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
PdgfaP20033 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
PdgfaP20033 Gm13337-201ENSMUST00000119183 1594 ntBASIC14.35□□□□□ -0.11
PdgfaP20033 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
PdgfaP20033 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
PdgfaP20033 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
PdgfaP20033 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC14.35□□□□□ -0.11
PdgfaP20033 Gm4609-201ENSMUST00000106443 1002 ntBASIC14.35□□□□□ -0.11
PdgfaP20033 Gm5138-201ENSMUST00000113842 1002 ntBASIC14.35□□□□□ -0.11
PdgfaP20033 Gm15191-201ENSMUST00000117933 1000 ntBASIC14.35□□□□□ -0.11
PdgfaP20033 Gm12182-201ENSMUST00000118655 1008 ntBASIC14.35□□□□□ -0.11
PdgfaP20033 Gm13882-201ENSMUST00000120886 1002 ntBASIC14.35□□□□□ -0.11
PdgfaP20033 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC14.35□□□□□ -0.11
PdgfaP20033 Gm10284-201ENSMUST00000145057 1005 ntBASIC14.35□□□□□ -0.11
PdgfaP20033 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
PdgfaP20033 Gm10481-201ENSMUST00000179228 1002 ntBASIC14.35□□□□□ -0.11
PdgfaP20033 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC14.35□□□□□ -0.11
PdgfaP20033 Gm2574-201ENSMUST00000181051 1002 ntBASIC14.35□□□□□ -0.11
PdgfaP20033 Gm3200-201ENSMUST00000181493 1002 ntBASIC14.35□□□□□ -0.11
PdgfaP20033 Gm8825-201ENSMUST00000182565 998 ntBASIC14.35□□□□□ -0.11
PdgfaP20033 Gm4518-201ENSMUST00000182638 718 ntBASIC14.35□□□□□ -0.11
PdgfaP20033 Gm8330-201ENSMUST00000182754 1008 ntBASIC14.35□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms