Protein–RNA interactions for Protein: P10855

Ccl3, C-C motif chemokine 3, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl3P10855 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ccl3P10855 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ccl3P10855 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ccl3P10855 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Ccl3P10855 AC133083.1-201ENSMUST00000221736 2209 ntBASIC12.69□□□□□ -0.38
Ccl3P10855 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ccl3P10855 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ccl3P10855 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ccl3P10855 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ccl3P10855 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ccl3P10855 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ccl3P10855 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ccl3P10855 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC12.68□□□□□ -0.38
Ccl3P10855 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ccl3P10855 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ccl3P10855 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ccl3P10855 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ccl3P10855 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Ccl3P10855 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ccl3P10855 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ccl3P10855 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ccl3P10855 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ccl3P10855 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ccl3P10855 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ccl3P10855 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ccl3P10855 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ccl3P10855 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Ccl3P10855 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
Ccl3P10855 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Ccl3P10855 Gm11425-201ENSMUST00000119608 498 ntBASIC12.68□□□□□ -0.38
Ccl3P10855 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Ccl3P10855 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC12.68□□□□□ -0.38
Ccl3P10855 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ccl3P10855 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Ccl3P10855 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Ccl3P10855 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Ccl3P10855 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Ccl3P10855 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Ccl3P10855 Gm18307-201ENSMUST00000206864 949 ntBASIC12.68□□□□□ -0.38
Ccl3P10855 Gm5425-201ENSMUST00000214125 459 ntBASIC12.68□□□□□ -0.38
Ccl3P10855 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC12.68□□□□□ -0.38
Ccl3P10855 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ccl3P10855 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ccl3P10855 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Ccl3P10855 Gm9396-201ENSMUST00000076703 567 ntBASIC12.68□□□□□ -0.38
Ccl3P10855 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ccl3P10855 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ccl3P10855 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ccl3P10855 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ccl3P10855 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ccl3P10855 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ccl3P10855 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ccl3P10855 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ccl3P10855 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ccl3P10855 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ccl3P10855 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ccl3P10855 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ccl3P10855 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ccl3P10855 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ccl3P10855 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ccl3P10855 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Ccl3P10855 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Ccl3P10855 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Ccl3P10855 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ccl3P10855 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ccl3P10855 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ccl3P10855 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Ccl3P10855 Mir692-1-201ENSMUST00000102263 109 ntBASIC12.67□□□□□ -0.38
Ccl3P10855 Mir1938-201ENSMUST00000158746 100 ntBASIC12.67□□□□□ -0.38
Ccl3P10855 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC12.67□□□□□ -0.38
Ccl3P10855 Gm27892-201ENSMUST00000185017 106 ntBASIC12.67□□□□□ -0.38
Ccl3P10855 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC12.67□□□□□ -0.38
Ccl3P10855 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC12.67□□□□□ -0.38
Ccl3P10855 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ccl3P10855 Gm7446-201ENSMUST00000221035 1240 ntBASIC12.67□□□□□ -0.38
Ccl3P10855 AC156560.2-201ENSMUST00000221232 264 ntBASIC12.67□□□□□ -0.38
Ccl3P10855 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ccl3P10855 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
Ccl3P10855 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Ccl3P10855 Gm5356-201ENSMUST00000093326 615 ntBASIC12.67□□□□□ -0.38
Ccl3P10855 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ccl3P10855 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ccl3P10855 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ccl3P10855 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ccl3P10855 Serpine3-201ENSMUST00000171692 1402 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ccl3P10855 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Ccl3P10855 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Ccl3P10855 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC12.67□□□□□ -0.38
Ccl3P10855 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC12.67□□□□□ -0.38
Ccl3P10855 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Ccl3P10855 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Ccl3P10855 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Ccl3P10855 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ccl3P10855 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Ccl3P10855 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ccl3P10855 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
Ccl3P10855 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ccl3P10855 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ccl3P10855 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ccl3P10855 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 24.5 ms