Protein–RNA interactions for Protein: O54965

Rnf13, E3 ubiquitin-protein ligase RNF13, mousemouse

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf13O54965 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC13.1□□□□□ -0.31
Rnf13O54965 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Rnf13O54965 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC13.1□□□□□ -0.31
Rnf13O54965 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Rnf13O54965 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Rnf13O54965 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Rnf13O54965 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Rnf13O54965 AC119177.1-201ENSMUST00000227647 1332 ntBASIC13.1□□□□□ -0.31
Rnf13O54965 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Rnf13O54965 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Rnf13O54965 Ssr1-204ENSMUST00000225319 1610 ntBASIC13.1□□□□□ -0.31
Rnf13O54965 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC13.1□□□□□ -0.31
Rnf13O54965 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Rnf13O54965 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Rnf13O54965 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC13.09□□□□□ -0.31
Rnf13O54965 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Rnf13O54965 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Rnf13O54965 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Rnf13O54965 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC13.09□□□□□ -0.31
Rnf13O54965 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Rnf13O54965 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Rnf13O54965 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Rnf13O54965 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Rnf13O54965 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Rnf13O54965 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Rnf13O54965 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC13.09□□□□□ -0.31
Rnf13O54965 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Rnf13O54965 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Rnf13O54965 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Rnf13O54965 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Rnf13O54965 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Rnf13O54965 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC13.09□□□□□ -0.31
Rnf13O54965 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Rnf13O54965 Gm45167-201ENSMUST00000208007 322 ntBASIC13.09□□□□□ -0.31
Rnf13O54965 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Rnf13O54965 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC13.09□□□□□ -0.31
Rnf13O54965 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Rnf13O54965 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Rnf13O54965 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Rnf13O54965 Rps4l-201ENSMUST00000071745 943 ntBASIC13.09□□□□□ -0.31
Rnf13O54965 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Rnf13O54965 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Rnf13O54965 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Rnf13O54965 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Rnf13O54965 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Rnf13O54965 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Rnf13O54965 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Rnf13O54965 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Rnf13O54965 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Rnf13O54965 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Rnf13O54965 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.31
Rnf13O54965 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Rnf13O54965 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Rnf13O54965 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.31
Rnf13O54965 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Rnf13O54965 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC13.08□□□□□ -0.32
Rnf13O54965 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Rnf13O54965 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Rnf13O54965 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Rnf13O54965 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Rnf13O54965 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC13.08□□□□□ -0.32
Rnf13O54965 Gm9103-201ENSMUST00000119371 405 ntBASIC13.08□□□□□ -0.32
Rnf13O54965 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC13.08□□□□□ -0.32
Rnf13O54965 Gm7230-201ENSMUST00000173026 815 ntBASIC13.08□□□□□ -0.32
Rnf13O54965 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC13.08□□□□□ -0.32
Rnf13O54965 Gm6550-201ENSMUST00000187574 993 ntBASIC13.08□□□□□ -0.32
Rnf13O54965 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Rnf13O54965 Gm43935-201ENSMUST00000203569 1050 ntBASIC13.08□□□□□ -0.32
Rnf13O54965 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Rnf13O54965 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Rnf13O54965 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Rnf13O54965 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Rnf13O54965 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Rnf13O54965 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC13.08□□□□□ -0.32
Rnf13O54965 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Rnf13O54965 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Rnf13O54965 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Rnf13O54965 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Rnf13O54965 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Rnf13O54965 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Rnf13O54965 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
Rnf13O54965 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Rnf13O54965 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Rnf13O54965 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Rnf13O54965 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Rnf13O54965 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Rnf13O54965 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Rnf13O54965 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Rnf13O54965 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Rnf13O54965 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Rnf13O54965 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Rnf13O54965 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Rnf13O54965 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Rnf13O54965 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Rnf13O54965 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Rnf13O54965 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Rnf13O54965 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Rnf13O54965 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Rnf13O54965 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Rnf13O54965 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms