Protein–RNA interactions for Protein: O35134

Polr1a, DNA-directed RNA polymerase I subunit RPA1, mousemouse

Known RBP Predictions only

Length 1,717 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Polr1aO35134 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Polr1aO35134 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
Polr1aO35134 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC21.8■■□□□ 1.08
Polr1aO35134 Gm22331-201ENSMUST00000158066 136 ntBASIC21.8■■□□□ 1.08
Polr1aO35134 Ppm1h-208ENSMUST00000162969 811 ntTSL 3 BASIC21.8■■□□□ 1.08
Polr1aO35134 Gm27331-201ENSMUST00000183705 60 ntBASIC21.8■■□□□ 1.08
Polr1aO35134 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Polr1aO35134 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC21.8■■□□□ 1.08
Polr1aO35134 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Polr1aO35134 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Polr1aO35134 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
Polr1aO35134 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC21.79■■□□□ 1.08
Polr1aO35134 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Polr1aO35134 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Polr1aO35134 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Polr1aO35134 Gm4271-201ENSMUST00000174444 973 ntBASIC21.79■■□□□ 1.08
Polr1aO35134 Fkbp2-202ENSMUST00000177752 627 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Polr1aO35134 Gm29608-201ENSMUST00000190444 463 ntBASIC21.79■■□□□ 1.08
Polr1aO35134 Gm43118-201ENSMUST00000199149 775 ntBASIC21.79■■□□□ 1.08
Polr1aO35134 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Polr1aO35134 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC21.79■■□□□ 1.08
Polr1aO35134 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Polr1aO35134 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Polr1aO35134 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
Polr1aO35134 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC21.79■■□□□ 1.08
Polr1aO35134 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Polr1aO35134 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Polr1aO35134 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
Polr1aO35134 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
Polr1aO35134 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC21.78■■□□□ 1.08
Polr1aO35134 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Polr1aO35134 Gm29154-230ENSMUST00000215044 1165 ntTSL 5 BASIC21.78■■□□□ 1.08
Polr1aO35134 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC21.78■■□□□ 1.08
Polr1aO35134 Gm5161-201ENSMUST00000075243 853 ntBASIC21.78■■□□□ 1.08
Polr1aO35134 Olfr707-201ENSMUST00000088687 924 ntAPPRIS P1 BASIC21.78■■□□□ 1.08
Polr1aO35134 Olfr1532-ps1-201ENSMUST00000098140 924 ntAPPRIS P1 BASIC21.78■■□□□ 1.08
Polr1aO35134 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC21.78■■□□□ 1.08
Polr1aO35134 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Polr1aO35134 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Polr1aO35134 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Polr1aO35134 Gm9347-201ENSMUST00000211473 1607 ntBASIC21.78■■□□□ 1.08
Polr1aO35134 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Polr1aO35134 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Polr1aO35134 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Polr1aO35134 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.08
Polr1aO35134 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC21.77■■□□□ 1.08
Polr1aO35134 Gm15770-201ENSMUST00000117498 584 ntBASIC21.77■■□□□ 1.08
Polr1aO35134 Smim5-201ENSMUST00000131566 700 ntTSL 2 BASIC21.77■■□□□ 1.08
Polr1aO35134 Abhd14b-202ENSMUST00000185347 1200 ntAPPRIS P1 TSL 3 BASIC21.77■■□□□ 1.08
Polr1aO35134 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
Polr1aO35134 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Polr1aO35134 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
Polr1aO35134 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
Polr1aO35134 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
Polr1aO35134 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Polr1aO35134 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Polr1aO35134 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC21.77■■□□□ 1.08
Polr1aO35134 Gm11661-201ENSMUST00000121761 1327 ntBASIC21.77■■□□□ 1.08
Polr1aO35134 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC21.77■■□□□ 1.08
Polr1aO35134 Dctn4-202ENSMUST00000223590 1530 ntBASIC21.77■■□□□ 1.08
Polr1aO35134 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Polr1aO35134 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
Polr1aO35134 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC21.77■■□□□ 1.08
Polr1aO35134 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC21.77■■□□□ 1.08
Polr1aO35134 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.08
Polr1aO35134 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.08
Polr1aO35134 Gm12203-201ENSMUST00000118235 598 ntBASIC21.77■■□□□ 1.08
Polr1aO35134 Gm12209-201ENSMUST00000120089 596 ntBASIC21.77■■□□□ 1.08
Polr1aO35134 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Polr1aO35134 Gm26618-201ENSMUST00000181123 497 ntTSL 2 BASIC21.77■■□□□ 1.08
Polr1aO35134 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Polr1aO35134 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Polr1aO35134 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Polr1aO35134 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC21.77■■□□□ 1.07
Polr1aO35134 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.07
Polr1aO35134 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
Polr1aO35134 Gm6159-201ENSMUST00000191249 1724 ntBASIC21.77■■□□□ 1.07
Polr1aO35134 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC21.76■■□□□ 1.07
Polr1aO35134 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC21.76■■□□□ 1.07
Polr1aO35134 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC21.76■■□□□ 1.07
Polr1aO35134 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Polr1aO35134 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Polr1aO35134 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Polr1aO35134 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC21.76■■□□□ 1.07
Polr1aO35134 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
Polr1aO35134 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC21.76■■□□□ 1.07
Polr1aO35134 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
Polr1aO35134 Nudt17-202ENSMUST00000171249 1110 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Polr1aO35134 Gm40466-201ENSMUST00000212174 422 ntBASIC21.76■■□□□ 1.07
Polr1aO35134 Spata33-205ENSMUST00000212523 486 ntTSL 3 BASIC21.76■■□□□ 1.07
Polr1aO35134 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Polr1aO35134 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Polr1aO35134 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
Polr1aO35134 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Polr1aO35134 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Polr1aO35134 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Polr1aO35134 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
Polr1aO35134 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Polr1aO35134 Gm5687-201ENSMUST00000118252 640 ntBASIC21.75■■□□□ 1.07
Polr1aO35134 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC21.75■■□□□ 1.07
Retrieved 100 of 76,532 protein–RNA pairs in 38.7 ms