Protein–RNA interactions for Protein: O09113

Otp, Homeobox protein orthopedia, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OtpO09113 Gm10290-201ENSMUST00000200451 999 ntBASIC12.88□□□□□ -0.35
OtpO09113 Gm44945-201ENSMUST00000206764 1187 ntBASIC12.88□□□□□ -0.35
OtpO09113 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC12.88□□□□□ -0.35
OtpO09113 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
OtpO09113 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
OtpO09113 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
OtpO09113 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
OtpO09113 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
OtpO09113 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
OtpO09113 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
OtpO09113 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
OtpO09113 Gm8096-201ENSMUST00000209921 1591 ntBASIC12.88□□□□□ -0.35
OtpO09113 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC12.88□□□□□ -0.35
OtpO09113 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
OtpO09113 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
OtpO09113 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
OtpO09113 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
OtpO09113 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
OtpO09113 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
OtpO09113 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
OtpO09113 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
OtpO09113 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC12.88□□□□□ -0.35
OtpO09113 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
OtpO09113 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC12.88□□□□□ -0.35
OtpO09113 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
OtpO09113 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC12.88□□□□□ -0.35
OtpO09113 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC12.88□□□□□ -0.35
OtpO09113 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
OtpO09113 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
OtpO09113 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
OtpO09113 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC12.88□□□□□ -0.35
OtpO09113 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
OtpO09113 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
OtpO09113 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC12.87□□□□□ -0.35
OtpO09113 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
OtpO09113 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
OtpO09113 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
OtpO09113 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC12.87□□□□□ -0.35
OtpO09113 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
OtpO09113 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
OtpO09113 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
OtpO09113 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC12.87□□□□□ -0.35
OtpO09113 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC12.87□□□□□ -0.35
OtpO09113 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
OtpO09113 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
OtpO09113 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
OtpO09113 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC12.87□□□□□ -0.35
OtpO09113 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC12.87□□□□□ -0.35
OtpO09113 AC090659.1-201ENSMUST00000224334 768 ntBASIC12.87□□□□□ -0.35
OtpO09113 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
OtpO09113 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
OtpO09113 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
OtpO09113 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
OtpO09113 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
OtpO09113 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
OtpO09113 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
OtpO09113 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC12.87□□□□□ -0.35
OtpO09113 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
OtpO09113 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
OtpO09113 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
OtpO09113 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
OtpO09113 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
OtpO09113 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
OtpO09113 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
OtpO09113 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
OtpO09113 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
OtpO09113 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
OtpO09113 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
OtpO09113 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC12.87□□□□□ -0.35
OtpO09113 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
OtpO09113 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
OtpO09113 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
OtpO09113 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
OtpO09113 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
OtpO09113 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC12.86□□□□□ -0.35
OtpO09113 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC12.86□□□□□ -0.35
OtpO09113 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
OtpO09113 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
OtpO09113 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
OtpO09113 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC12.86□□□□□ -0.35
OtpO09113 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC12.86□□□□□ -0.35
OtpO09113 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
OtpO09113 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
OtpO09113 Gm8749-201ENSMUST00000117737 331 ntBASIC12.86□□□□□ -0.35
OtpO09113 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
OtpO09113 Gm16026-204ENSMUST00000162652 683 ntBASIC12.86□□□□□ -0.35
OtpO09113 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC12.86□□□□□ -0.35
OtpO09113 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC12.86□□□□□ -0.35
OtpO09113 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC12.86□□□□□ -0.35
OtpO09113 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC12.86□□□□□ -0.35
OtpO09113 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC12.86□□□□□ -0.35
OtpO09113 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
OtpO09113 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
OtpO09113 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
OtpO09113 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC12.86□□□□□ -0.35
OtpO09113 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
OtpO09113 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
OtpO09113 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
OtpO09113 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
OtpO09113 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 27 ms