Protein–RNA interactions for Protein: J3QM54

Gm3727, Predicted gene 3727, mousemouse

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3727J3QM54 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Gm3727J3QM54 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Gm3727J3QM54 AC121801.1-201ENSMUST00000225363 1899 ntBASIC12.25□□□□□ -0.45
Gm3727J3QM54 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Gm3727J3QM54 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Gm3727J3QM54 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC12.25□□□□□ -0.45
Gm3727J3QM54 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Gm3727J3QM54 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Gm3727J3QM54 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC12.25□□□□□ -0.45
Gm3727J3QM54 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Gm3727J3QM54 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC12.25□□□□□ -0.45
Gm3727J3QM54 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Gm3727J3QM54 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Gm3727J3QM54 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC12.25□□□□□ -0.45
Gm3727J3QM54 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Gm3727J3QM54 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Gm3727J3QM54 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Gm3727J3QM54 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Gm3727J3QM54 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Gm3727J3QM54 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC12.25□□□□□ -0.45
Gm3727J3QM54 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Gm3727J3QM54 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Gm3727J3QM54 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Gm3727J3QM54 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Gm3727J3QM54 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Gm3727J3QM54 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Gm3727J3QM54 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC12.25□□□□□ -0.45
Gm3727J3QM54 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC12.25□□□□□ -0.45
Gm3727J3QM54 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Gm3727J3QM54 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Gm3727J3QM54 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Gm3727J3QM54 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC12.24□□□□□ -0.45
Gm3727J3QM54 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Gm3727J3QM54 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Gm3727J3QM54 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Gm3727J3QM54 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Gm3727J3QM54 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Gm3727J3QM54 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Gm3727J3QM54 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC12.24□□□□□ -0.45
Gm3727J3QM54 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Gm3727J3QM54 Trav13-3-201ENSMUST00000117226 336 ntBASIC12.24□□□□□ -0.45
Gm3727J3QM54 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Gm3727J3QM54 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC12.24□□□□□ -0.45
Gm3727J3QM54 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC12.24□□□□□ -0.45
Gm3727J3QM54 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Gm3727J3QM54 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Gm3727J3QM54 Gm45630-201ENSMUST00000210243 1911 ntBASIC12.24□□□□□ -0.45
Gm3727J3QM54 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Gm3727J3QM54 AC164567.1-201ENSMUST00000219185 960 ntBASIC12.24□□□□□ -0.45
Gm3727J3QM54 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Gm3727J3QM54 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Gm3727J3QM54 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Gm3727J3QM54 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Gm3727J3QM54 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Gm3727J3QM54 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Gm3727J3QM54 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Gm3727J3QM54 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Gm3727J3QM54 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC12.24□□□□□ -0.45
Gm3727J3QM54 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Gm3727J3QM54 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Gm3727J3QM54 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Gm3727J3QM54 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Gm3727J3QM54 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Gm3727J3QM54 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Gm3727J3QM54 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Gm3727J3QM54 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Gm3727J3QM54 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Gm3727J3QM54 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Gm3727J3QM54 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Gm3727J3QM54 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Gm3727J3QM54 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Gm3727J3QM54 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Gm3727J3QM54 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC12.23□□□□□ -0.45
Gm3727J3QM54 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Gm3727J3QM54 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Gm3727J3QM54 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Gm3727J3QM54 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Gm3727J3QM54 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Gm3727J3QM54 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Gm3727J3QM54 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Gm3727J3QM54 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Gm3727J3QM54 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Gm3727J3QM54 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Gm3727J3QM54 Gm12497-201ENSMUST00000138778 237 ntBASIC12.23□□□□□ -0.45
Gm3727J3QM54 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC12.23□□□□□ -0.45
Gm3727J3QM54 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Gm3727J3QM54 Gm18041-201ENSMUST00000218210 618 ntBASIC12.23□□□□□ -0.45
Gm3727J3QM54 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC12.23□□□□□ -0.45
Gm3727J3QM54 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Gm3727J3QM54 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Gm3727J3QM54 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Gm3727J3QM54 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC12.23□□□□□ -0.45
Gm3727J3QM54 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Gm3727J3QM54 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Gm3727J3QM54 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Gm3727J3QM54 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Gm3727J3QM54 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Gm3727J3QM54 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC12.23□□□□□ -0.45
Gm3727J3QM54 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Gm3727J3QM54 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms