Protein–RNA interactions for Protein: J3KMR8

Gm17535, Predicted gene, 17535, mousemouse

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm17535J3KMR8 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Gm17535J3KMR8 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Gm17535J3KMR8 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Gm17535J3KMR8 Gm2423-201ENSMUST00000074863 733 ntBASIC15.3■□□□□ 0.04
Gm17535J3KMR8 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Gm17535J3KMR8 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Gm17535J3KMR8 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Gm17535J3KMR8 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Gm17535J3KMR8 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Gm17535J3KMR8 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC15.3■□□□□ 0.04
Gm17535J3KMR8 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Gm17535J3KMR8 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC15.29■□□□□ 0.04
Gm17535J3KMR8 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Gm17535J3KMR8 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Gm17535J3KMR8 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Gm17535J3KMR8 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC15.29■□□□□ 0.04
Gm17535J3KMR8 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Gm17535J3KMR8 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Gm17535J3KMR8 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Gm17535J3KMR8 Ssr1-204ENSMUST00000225319 1610 ntBASIC15.29■□□□□ 0.04
Gm17535J3KMR8 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Gm17535J3KMR8 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Gm17535J3KMR8 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC15.29■□□□□ 0.04
Gm17535J3KMR8 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Gm17535J3KMR8 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC15.29■□□□□ 0.04
Gm17535J3KMR8 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC15.29■□□□□ 0.04
Gm17535J3KMR8 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
Gm17535J3KMR8 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Gm17535J3KMR8 Gm24694-201ENSMUST00000180054 110 ntBASIC15.29■□□□□ 0.04
Gm17535J3KMR8 Gm27663-201ENSMUST00000184839 110 ntBASIC15.29■□□□□ 0.04
Gm17535J3KMR8 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC15.29■□□□□ 0.04
Gm17535J3KMR8 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC15.29■□□□□ 0.04
Gm17535J3KMR8 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC15.29■□□□□ 0.04
Gm17535J3KMR8 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC15.29■□□□□ 0.04
Gm17535J3KMR8 CT025535.1-201ENSMUST00000227172 491 ntBASIC15.29■□□□□ 0.04
Gm17535J3KMR8 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Gm17535J3KMR8 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC15.29■□□□□ 0.04
Gm17535J3KMR8 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Gm17535J3KMR8 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Gm17535J3KMR8 Gm44981-201ENSMUST00000205549 1943 ntBASIC15.29■□□□□ 0.04
Gm17535J3KMR8 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Gm17535J3KMR8 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC15.29■□□□□ 0.04
Gm17535J3KMR8 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Gm17535J3KMR8 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Gm17535J3KMR8 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Gm17535J3KMR8 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Gm17535J3KMR8 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Gm17535J3KMR8 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Gm17535J3KMR8 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Gm17535J3KMR8 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Gm17535J3KMR8 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Gm17535J3KMR8 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Gm17535J3KMR8 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Gm17535J3KMR8 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Gm17535J3KMR8 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Gm17535J3KMR8 Gm15460-201ENSMUST00000118147 391 ntBASIC15.28■□□□□ 0.04
Gm17535J3KMR8 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC15.28■□□□□ 0.04
Gm17535J3KMR8 Gm16215-201ENSMUST00000161990 637 ntBASIC15.28■□□□□ 0.04
Gm17535J3KMR8 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Gm17535J3KMR8 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Gm17535J3KMR8 Gm7390-201ENSMUST00000212452 1216 ntBASIC15.28■□□□□ 0.04
Gm17535J3KMR8 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC15.28■□□□□ 0.04
Gm17535J3KMR8 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Gm17535J3KMR8 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Gm17535J3KMR8 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Gm17535J3KMR8 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Gm17535J3KMR8 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Gm17535J3KMR8 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Gm17535J3KMR8 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Gm17535J3KMR8 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Gm17535J3KMR8 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Gm17535J3KMR8 Gm45504-201ENSMUST00000211407 2107 ntBASIC15.28■□□□□ 0.04
Gm17535J3KMR8 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Gm17535J3KMR8 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Gm17535J3KMR8 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC15.27■□□□□ 0.04
Gm17535J3KMR8 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Gm17535J3KMR8 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Gm17535J3KMR8 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
Gm17535J3KMR8 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
Gm17535J3KMR8 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
Gm17535J3KMR8 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC15.27■□□□□ 0.04
Gm17535J3KMR8 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
Gm17535J3KMR8 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Gm17535J3KMR8 Gm7730-201ENSMUST00000212486 454 ntBASIC15.27■□□□□ 0.04
Gm17535J3KMR8 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Gm17535J3KMR8 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Gm17535J3KMR8 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
Gm17535J3KMR8 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Gm17535J3KMR8 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Gm17535J3KMR8 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
Gm17535J3KMR8 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Gm17535J3KMR8 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Gm17535J3KMR8 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Gm17535J3KMR8 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC15.27■□□□□ 0.03
Gm17535J3KMR8 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Gm17535J3KMR8 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Gm17535J3KMR8 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC15.26■□□□□ 0.03
Gm17535J3KMR8 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC15.26■□□□□ 0.03
Gm17535J3KMR8 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Gm17535J3KMR8 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 45.7 ms