Protein–RNA interactions for Protein: G3X9Z4

Pcf11, Cleavage and polyadenylation factor subunit homolog (S. cerevisiae), mousemouse

Predictions only

Length 1,553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcf11G3X9Z4 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Pcf11G3X9Z4 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
Pcf11G3X9Z4 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC21.51■■□□□ 1.03
Pcf11G3X9Z4 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Pcf11G3X9Z4 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Pcf11G3X9Z4 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC21.51■■□□□ 1.03
Pcf11G3X9Z4 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC21.51■■□□□ 1.03
Pcf11G3X9Z4 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Pcf11G3X9Z4 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Pcf11G3X9Z4 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Pcf11G3X9Z4 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
Pcf11G3X9Z4 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Pcf11G3X9Z4 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Pcf11G3X9Z4 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Pcf11G3X9Z4 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC21.51■■□□□ 1.03
Pcf11G3X9Z4 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Pcf11G3X9Z4 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Pcf11G3X9Z4 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC21.5■■□□□ 1.03
Pcf11G3X9Z4 AC131068.2-201ENSMUST00000226175 1453 ntBASIC21.5■■□□□ 1.03
Pcf11G3X9Z4 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
Pcf11G3X9Z4 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Pcf11G3X9Z4 AC131690.1-201ENSMUST00000218406 374 ntBASIC21.5■■□□□ 1.03
Pcf11G3X9Z4 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Pcf11G3X9Z4 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Pcf11G3X9Z4 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Pcf11G3X9Z4 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC21.5■■□□□ 1.03
Pcf11G3X9Z4 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Pcf11G3X9Z4 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Pcf11G3X9Z4 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Pcf11G3X9Z4 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Pcf11G3X9Z4 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Pcf11G3X9Z4 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
Pcf11G3X9Z4 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC21.49■■□□□ 1.03
Pcf11G3X9Z4 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Pcf11G3X9Z4 Gm15824-201ENSMUST00000119516 955 ntBASIC21.49■■□□□ 1.03
Pcf11G3X9Z4 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC21.49■■□□□ 1.03
Pcf11G3X9Z4 Gm7287-201ENSMUST00000205267 602 ntBASIC21.49■■□□□ 1.03
Pcf11G3X9Z4 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
Pcf11G3X9Z4 AC122459.1-201ENSMUST00000228373 885 ntBASIC21.49■■□□□ 1.03
Pcf11G3X9Z4 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC21.49■■□□□ 1.03
Pcf11G3X9Z4 Gm9899-201ENSMUST00000065519 555 ntBASIC21.49■■□□□ 1.03
Pcf11G3X9Z4 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC21.49■■□□□ 1.03
Pcf11G3X9Z4 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Pcf11G3X9Z4 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Pcf11G3X9Z4 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC21.49■■□□□ 1.03
Pcf11G3X9Z4 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Pcf11G3X9Z4 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Pcf11G3X9Z4 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Pcf11G3X9Z4 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Pcf11G3X9Z4 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Pcf11G3X9Z4 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Pcf11G3X9Z4 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Pcf11G3X9Z4 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
Pcf11G3X9Z4 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
Pcf11G3X9Z4 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
Pcf11G3X9Z4 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Pcf11G3X9Z4 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC21.49■■□□□ 1.03
Pcf11G3X9Z4 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Pcf11G3X9Z4 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC21.48■■□□□ 1.03
Pcf11G3X9Z4 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Pcf11G3X9Z4 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Pcf11G3X9Z4 Gm8835-201ENSMUST00000173096 1169 ntBASIC21.48■■□□□ 1.03
Pcf11G3X9Z4 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Pcf11G3X9Z4 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC21.48■■□□□ 1.03
Pcf11G3X9Z4 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Pcf11G3X9Z4 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Pcf11G3X9Z4 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Pcf11G3X9Z4 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Pcf11G3X9Z4 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
Pcf11G3X9Z4 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC21.48■■□□□ 1.03
Pcf11G3X9Z4 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Pcf11G3X9Z4 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Pcf11G3X9Z4 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Pcf11G3X9Z4 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC21.48■■□□□ 1.03
Pcf11G3X9Z4 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
Pcf11G3X9Z4 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
Pcf11G3X9Z4 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
Pcf11G3X9Z4 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Pcf11G3X9Z4 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Pcf11G3X9Z4 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC21.48■■□□□ 1.03
Pcf11G3X9Z4 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC21.48■■□□□ 1.03
Pcf11G3X9Z4 Gm12928-201ENSMUST00000117115 573 ntBASIC21.48■■□□□ 1.03
Pcf11G3X9Z4 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC21.48■■□□□ 1.03
Pcf11G3X9Z4 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC21.48■■□□□ 1.03
Pcf11G3X9Z4 Tmem52-204ENSMUST00000178188 908 ntAPPRIS ALT2 TSL 2 BASIC21.48■■□□□ 1.03
Pcf11G3X9Z4 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC21.48■■□□□ 1.03
Pcf11G3X9Z4 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Pcf11G3X9Z4 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Pcf11G3X9Z4 Gm13050-201ENSMUST00000122149 1345 ntBASIC21.48■■□□□ 1.03
Pcf11G3X9Z4 Gm9816-201ENSMUST00000122292 1414 ntBASIC21.48■■□□□ 1.03
Pcf11G3X9Z4 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
Pcf11G3X9Z4 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Pcf11G3X9Z4 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Pcf11G3X9Z4 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Pcf11G3X9Z4 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
Pcf11G3X9Z4 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Pcf11G3X9Z4 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Pcf11G3X9Z4 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC21.47■■□□□ 1.03
Pcf11G3X9Z4 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
Pcf11G3X9Z4 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC21.47■■□□□ 1.03
Retrieved 100 of 76,532 protein–RNA pairs in 24.4 ms