Protein–RNA interactions for Protein: E0CXC2

Gm28043, E3 ubiquitin-protein ligase RNF8, mousemouse

Predictions only

Length 719 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28043E0CXC2 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Gm28043E0CXC2 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Gm28043E0CXC2 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC14.5□□□□□ -0.09
Gm28043E0CXC2 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Gm28043E0CXC2 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Gm28043E0CXC2 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC14.5□□□□□ -0.09
Gm28043E0CXC2 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Gm28043E0CXC2 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Gm28043E0CXC2 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Gm28043E0CXC2 Gucy2e-201ENSMUST00000021259 8331 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Gm28043E0CXC2 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Gm28043E0CXC2 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Gm28043E0CXC2 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Gm28043E0CXC2 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Gm28043E0CXC2 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Gm28043E0CXC2 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
Gm28043E0CXC2 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Gm28043E0CXC2 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Gm28043E0CXC2 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Gm28043E0CXC2 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Gm28043E0CXC2 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Gm28043E0CXC2 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC14.49□□□□□ -0.09
Gm28043E0CXC2 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC14.49□□□□□ -0.09
Gm28043E0CXC2 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Gm28043E0CXC2 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Gm28043E0CXC2 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Gm28043E0CXC2 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Gm28043E0CXC2 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC14.49□□□□□ -0.09
Gm28043E0CXC2 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
Gm28043E0CXC2 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Gm28043E0CXC2 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Gm28043E0CXC2 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC14.49□□□□□ -0.09
Gm28043E0CXC2 Gm1401-201ENSMUST00000122048 772 ntBASIC14.49□□□□□ -0.09
Gm28043E0CXC2 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC14.49□□□□□ -0.09
Gm28043E0CXC2 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC14.49□□□□□ -0.09
Gm28043E0CXC2 Psmb5-202ENSMUST00000227257 622 ntBASIC14.49□□□□□ -0.09
Gm28043E0CXC2 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Gm28043E0CXC2 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
Gm28043E0CXC2 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Gm28043E0CXC2 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
Gm28043E0CXC2 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
Gm28043E0CXC2 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Gm28043E0CXC2 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
Gm28043E0CXC2 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Gm28043E0CXC2 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
Gm28043E0CXC2 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC14.49□□□□□ -0.09
Gm28043E0CXC2 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Gm28043E0CXC2 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Gm28043E0CXC2 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Gm28043E0CXC2 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
Gm28043E0CXC2 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Gm28043E0CXC2 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Gm28043E0CXC2 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
Gm28043E0CXC2 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Gm28043E0CXC2 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
Gm28043E0CXC2 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Gm28043E0CXC2 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Gm28043E0CXC2 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Gm28043E0CXC2 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC14.48□□□□□ -0.09
Gm28043E0CXC2 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Gm28043E0CXC2 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Gm28043E0CXC2 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Gm28043E0CXC2 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Gm28043E0CXC2 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
Gm28043E0CXC2 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Gm28043E0CXC2 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Gm28043E0CXC2 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
Gm28043E0CXC2 Gm14140-201ENSMUST00000119999 995 ntBASIC14.48□□□□□ -0.09
Gm28043E0CXC2 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Gm28043E0CXC2 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC14.48□□□□□ -0.09
Gm28043E0CXC2 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Gm28043E0CXC2 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Gm28043E0CXC2 Gm18246-201ENSMUST00000221023 728 ntBASIC14.48□□□□□ -0.09
Gm28043E0CXC2 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Gm28043E0CXC2 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Gm28043E0CXC2 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Gm28043E0CXC2 Celf4-206ENSMUST00000224553 1729 ntBASIC14.48□□□□□ -0.09
Gm28043E0CXC2 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC14.48□□□□□ -0.09
Gm28043E0CXC2 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Gm28043E0CXC2 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Gm28043E0CXC2 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
Gm28043E0CXC2 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Gm28043E0CXC2 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
Gm28043E0CXC2 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Gm28043E0CXC2 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Gm28043E0CXC2 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Gm28043E0CXC2 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Gm28043E0CXC2 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Gm28043E0CXC2 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Gm28043E0CXC2 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Gm28043E0CXC2 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC14.48□□□□□ -0.09
Gm28043E0CXC2 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Gm28043E0CXC2 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Gm28043E0CXC2 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC14.48□□□□□ -0.09
Gm28043E0CXC2 Gm19863-201ENSMUST00000192480 2218 ntBASIC14.47□□□□□ -0.09
Gm28043E0CXC2 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Gm28043E0CXC2 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Gm28043E0CXC2 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Gm28043E0CXC2 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Gm28043E0CXC2 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms