Protein–RNA interactions for Protein: B1AVM1

Gm12887, Predicted gene 12887, mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm12887B1AVM1 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Gm12887B1AVM1 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Gm12887B1AVM1 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Gm12887B1AVM1 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC11.68□□□□□ -0.54
Gm12887B1AVM1 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Gm12887B1AVM1 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Gm12887B1AVM1 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Gm12887B1AVM1 Olfr607-202ENSMUST00000214347 5706 ntAPPRIS P5 TSL 5 BASIC11.67□□□□□ -0.54
Gm12887B1AVM1 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Gm12887B1AVM1 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Gm12887B1AVM1 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Gm12887B1AVM1 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Gm12887B1AVM1 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Gm12887B1AVM1 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Gm12887B1AVM1 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Gm12887B1AVM1 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Gm12887B1AVM1 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Gm12887B1AVM1 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC11.67□□□□□ -0.54
Gm12887B1AVM1 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Gm12887B1AVM1 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Gm12887B1AVM1 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC11.67□□□□□ -0.54
Gm12887B1AVM1 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Gm12887B1AVM1 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC11.67□□□□□ -0.54
Gm12887B1AVM1 Gm9726-201ENSMUST00000180321 678 ntBASIC11.67□□□□□ -0.54
Gm12887B1AVM1 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Gm12887B1AVM1 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Gm12887B1AVM1 CT010506.4-201ENSMUST00000225457 351 ntBASIC11.67□□□□□ -0.54
Gm12887B1AVM1 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Gm12887B1AVM1 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Gm12887B1AVM1 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Gm12887B1AVM1 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Gm12887B1AVM1 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Gm12887B1AVM1 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Gm12887B1AVM1 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Gm12887B1AVM1 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Gm12887B1AVM1 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Gm12887B1AVM1 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Gm12887B1AVM1 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC11.67□□□□□ -0.54
Gm12887B1AVM1 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Gm12887B1AVM1 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Gm12887B1AVM1 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Gm12887B1AVM1 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Gm12887B1AVM1 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Gm12887B1AVM1 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Gm12887B1AVM1 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Gm12887B1AVM1 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Gm12887B1AVM1 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Gm12887B1AVM1 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC11.67□□□□□ -0.54
Gm12887B1AVM1 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Gm12887B1AVM1 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Gm12887B1AVM1 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Gm12887B1AVM1 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Gm12887B1AVM1 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
Gm12887B1AVM1 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Gm12887B1AVM1 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Gm12887B1AVM1 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Gm12887B1AVM1 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Gm12887B1AVM1 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Gm12887B1AVM1 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Gm12887B1AVM1 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC11.66□□□□□ -0.54
Gm12887B1AVM1 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Gm12887B1AVM1 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Gm12887B1AVM1 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Gm12887B1AVM1 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Gm12887B1AVM1 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC11.66□□□□□ -0.54
Gm12887B1AVM1 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Gm12887B1AVM1 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC11.66□□□□□ -0.54
Gm12887B1AVM1 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC11.66□□□□□ -0.54
Gm12887B1AVM1 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC11.66□□□□□ -0.54
Gm12887B1AVM1 Gm25016-201ENSMUST00000158399 131 ntBASIC11.66□□□□□ -0.54
Gm12887B1AVM1 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Gm12887B1AVM1 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC11.66□□□□□ -0.54
Gm12887B1AVM1 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC11.66□□□□□ -0.54
Gm12887B1AVM1 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Gm12887B1AVM1 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Gm12887B1AVM1 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Gm12887B1AVM1 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Gm12887B1AVM1 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC11.66□□□□□ -0.54
Gm12887B1AVM1 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Gm12887B1AVM1 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC11.66□□□□□ -0.54
Gm12887B1AVM1 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
Gm12887B1AVM1 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Gm12887B1AVM1 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Gm12887B1AVM1 Gm37411-201ENSMUST00000194180 2282 ntBASIC11.66□□□□□ -0.54
Gm12887B1AVM1 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Gm12887B1AVM1 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Gm12887B1AVM1 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Gm12887B1AVM1 Gucy2e-201ENSMUST00000021259 8331 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Gm12887B1AVM1 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Gm12887B1AVM1 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Gm12887B1AVM1 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Gm12887B1AVM1 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Gm12887B1AVM1 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Gm12887B1AVM1 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Gm12887B1AVM1 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Gm12887B1AVM1 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
Gm12887B1AVM1 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Gm12887B1AVM1 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Gm12887B1AVM1 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Gm12887B1AVM1 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 27 ms