Protein–RNA interactions for Protein: A0A140LIT1

Ccdc194, Coiled-coil domain-containing protein 194, mousemouse

Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc194A0A140LIT1 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ccdc194A0A140LIT1 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ccdc194A0A140LIT1 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ccdc194A0A140LIT1 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Ccdc194A0A140LIT1 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Ccdc194A0A140LIT1 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ccdc194A0A140LIT1 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Ccdc194A0A140LIT1 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ccdc194A0A140LIT1 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ccdc194A0A140LIT1 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ccdc194A0A140LIT1 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ccdc194A0A140LIT1 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ccdc194A0A140LIT1 Gm14042-201ENSMUST00000120139 833 ntBASIC14.38□□□□□ -0.11
Ccdc194A0A140LIT1 Gm13597-201ENSMUST00000121239 375 ntBASIC14.38□□□□□ -0.11
Ccdc194A0A140LIT1 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ccdc194A0A140LIT1 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC14.38□□□□□ -0.11
Ccdc194A0A140LIT1 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Ccdc194A0A140LIT1 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Ccdc194A0A140LIT1 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Ccdc194A0A140LIT1 Thap2-203ENSMUST00000218989 527 ntBASIC14.38□□□□□ -0.11
Ccdc194A0A140LIT1 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ccdc194A0A140LIT1 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ccdc194A0A140LIT1 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Ccdc194A0A140LIT1 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC14.38□□□□□ -0.11
Ccdc194A0A140LIT1 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Ccdc194A0A140LIT1 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ccdc194A0A140LIT1 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
Ccdc194A0A140LIT1 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ccdc194A0A140LIT1 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ccdc194A0A140LIT1 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ccdc194A0A140LIT1 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ccdc194A0A140LIT1 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ccdc194A0A140LIT1 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ccdc194A0A140LIT1 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ccdc194A0A140LIT1 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Ccdc194A0A140LIT1 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ccdc194A0A140LIT1 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ccdc194A0A140LIT1 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ccdc194A0A140LIT1 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ccdc194A0A140LIT1 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC14.37□□□□□ -0.11
Ccdc194A0A140LIT1 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ccdc194A0A140LIT1 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Ccdc194A0A140LIT1 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ccdc194A0A140LIT1 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ccdc194A0A140LIT1 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Ccdc194A0A140LIT1 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ccdc194A0A140LIT1 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ccdc194A0A140LIT1 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Ccdc194A0A140LIT1 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ccdc194A0A140LIT1 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ccdc194A0A140LIT1 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
Ccdc194A0A140LIT1 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ccdc194A0A140LIT1 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ccdc194A0A140LIT1 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC14.37□□□□□ -0.11
Ccdc194A0A140LIT1 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ccdc194A0A140LIT1 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Ccdc194A0A140LIT1 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC14.37□□□□□ -0.11
Ccdc194A0A140LIT1 Olfr286-202ENSMUST00000205305 969 ntBASIC14.37□□□□□ -0.11
Ccdc194A0A140LIT1 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC14.37□□□□□ -0.11
Ccdc194A0A140LIT1 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Ccdc194A0A140LIT1 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ccdc194A0A140LIT1 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC14.37□□□□□ -0.11
Ccdc194A0A140LIT1 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ccdc194A0A140LIT1 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ccdc194A0A140LIT1 Tcf21-202ENSMUST00000218002 1788 ntBASIC14.37□□□□□ -0.11
Ccdc194A0A140LIT1 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Ccdc194A0A140LIT1 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ccdc194A0A140LIT1 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ccdc194A0A140LIT1 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ccdc194A0A140LIT1 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ccdc194A0A140LIT1 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ccdc194A0A140LIT1 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Ccdc194A0A140LIT1 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC14.36□□□□□ -0.11
Ccdc194A0A140LIT1 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ccdc194A0A140LIT1 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ccdc194A0A140LIT1 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ccdc194A0A140LIT1 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Ccdc194A0A140LIT1 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ccdc194A0A140LIT1 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Ccdc194A0A140LIT1 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ccdc194A0A140LIT1 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ccdc194A0A140LIT1 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
Ccdc194A0A140LIT1 Gm16198-201ENSMUST00000118766 670 ntBASIC14.36□□□□□ -0.11
Ccdc194A0A140LIT1 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Ccdc194A0A140LIT1 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC14.36□□□□□ -0.11
Ccdc194A0A140LIT1 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC14.36□□□□□ -0.11
Ccdc194A0A140LIT1 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ccdc194A0A140LIT1 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC14.36□□□□□ -0.11
Ccdc194A0A140LIT1 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ccdc194A0A140LIT1 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ccdc194A0A140LIT1 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ccdc194A0A140LIT1 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ccdc194A0A140LIT1 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC14.36□□□□□ -0.11
Ccdc194A0A140LIT1 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ccdc194A0A140LIT1 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Ccdc194A0A140LIT1 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ccdc194A0A140LIT1 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ccdc194A0A140LIT1 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC14.35□□□□□ -0.11
Ccdc194A0A140LIT1 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ccdc194A0A140LIT1 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms