Protein–RNA interactions for Protein: A0A0A6YWI9

Ighv1-11, Immunoglobulin heavy variable V1-11 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-11A0A0A6YWI9 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC10.21□□□□□ -0.77
Ighv1-11A0A0A6YWI9 Gm37019-201ENSMUST00000192133 2134 ntBASIC10.21□□□□□ -0.77
Ighv1-11A0A0A6YWI9 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Ighv1-11A0A0A6YWI9 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC10.21□□□□□ -0.77
Ighv1-11A0A0A6YWI9 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Ighv1-11A0A0A6YWI9 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Ighv1-11A0A0A6YWI9 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Ighv1-11A0A0A6YWI9 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC10.21□□□□□ -0.77
Ighv1-11A0A0A6YWI9 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Ighv1-11A0A0A6YWI9 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Ighv1-11A0A0A6YWI9 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Ighv1-11A0A0A6YWI9 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Ighv1-11A0A0A6YWI9 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Ighv1-11A0A0A6YWI9 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Ighv1-11A0A0A6YWI9 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.77
Ighv1-11A0A0A6YWI9 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC10.21□□□□□ -0.77
Ighv1-11A0A0A6YWI9 Gm13036-201ENSMUST00000117799 748 ntBASIC10.21□□□□□ -0.77
Ighv1-11A0A0A6YWI9 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Ighv1-11A0A0A6YWI9 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC10.21□□□□□ -0.77
Ighv1-11A0A0A6YWI9 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC10.21□□□□□ -0.77
Ighv1-11A0A0A6YWI9 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Ighv1-11A0A0A6YWI9 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC10.21□□□□□ -0.77
Ighv1-11A0A0A6YWI9 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Ighv1-11A0A0A6YWI9 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Ighv1-11A0A0A6YWI9 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC10.21□□□□□ -0.77
Ighv1-11A0A0A6YWI9 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Ighv1-11A0A0A6YWI9 AC164629.2-201ENSMUST00000217916 270 ntBASIC10.21□□□□□ -0.77
Ighv1-11A0A0A6YWI9 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Ighv1-11A0A0A6YWI9 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC10.21□□□□□ -0.77
Ighv1-11A0A0A6YWI9 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Ighv1-11A0A0A6YWI9 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Ighv1-11A0A0A6YWI9 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Ighv1-11A0A0A6YWI9 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Ighv1-11A0A0A6YWI9 Gm5366-201ENSMUST00000215494 1338 ntBASIC10.21□□□□□ -0.78
Ighv1-11A0A0A6YWI9 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
Ighv1-11A0A0A6YWI9 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC10.21□□□□□ -0.78
Ighv1-11A0A0A6YWI9 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC10.21□□□□□ -0.78
Ighv1-11A0A0A6YWI9 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Ighv1-11A0A0A6YWI9 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
Ighv1-11A0A0A6YWI9 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC10.21□□□□□ -0.78
Ighv1-11A0A0A6YWI9 Gm42769-201ENSMUST00000198576 1659 ntBASIC10.21□□□□□ -0.78
Ighv1-11A0A0A6YWI9 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Ighv1-11A0A0A6YWI9 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Ighv1-11A0A0A6YWI9 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC10.21□□□□□ -0.78
Ighv1-11A0A0A6YWI9 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
Ighv1-11A0A0A6YWI9 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Ighv1-11A0A0A6YWI9 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Ighv1-11A0A0A6YWI9 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC10.21□□□□□ -0.78
Ighv1-11A0A0A6YWI9 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC10.21□□□□□ -0.78
Ighv1-11A0A0A6YWI9 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Ighv1-11A0A0A6YWI9 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC10.21□□□□□ -0.78
Ighv1-11A0A0A6YWI9 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Ighv1-11A0A0A6YWI9 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Ighv1-11A0A0A6YWI9 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Ighv1-11A0A0A6YWI9 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Ighv1-11A0A0A6YWI9 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Ighv1-11A0A0A6YWI9 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Ighv1-11A0A0A6YWI9 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC10.2□□□□□ -0.78
Ighv1-11A0A0A6YWI9 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Ighv1-11A0A0A6YWI9 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Ighv1-11A0A0A6YWI9 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC10.2□□□□□ -0.78
Ighv1-11A0A0A6YWI9 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Ighv1-11A0A0A6YWI9 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Ighv1-11A0A0A6YWI9 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Ighv1-11A0A0A6YWI9 Gm8749-201ENSMUST00000117737 331 ntBASIC10.2□□□□□ -0.78
Ighv1-11A0A0A6YWI9 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Ighv1-11A0A0A6YWI9 Gm15593-201ENSMUST00000122085 1008 ntBASIC10.2□□□□□ -0.78
Ighv1-11A0A0A6YWI9 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Ighv1-11A0A0A6YWI9 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC10.2□□□□□ -0.78
Ighv1-11A0A0A6YWI9 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC10.2□□□□□ -0.78
Ighv1-11A0A0A6YWI9 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC10.2□□□□□ -0.78
Ighv1-11A0A0A6YWI9 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC10.2□□□□□ -0.78
Ighv1-11A0A0A6YWI9 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Ighv1-11A0A0A6YWI9 Gm42670-201ENSMUST00000201816 1292 ntBASIC10.2□□□□□ -0.78
Ighv1-11A0A0A6YWI9 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Ighv1-11A0A0A6YWI9 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Ighv1-11A0A0A6YWI9 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC10.2□□□□□ -0.78
Ighv1-11A0A0A6YWI9 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Ighv1-11A0A0A6YWI9 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Ighv1-11A0A0A6YWI9 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC10.2□□□□□ -0.78
Ighv1-11A0A0A6YWI9 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Ighv1-11A0A0A6YWI9 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC10.2□□□□□ -0.78
Ighv1-11A0A0A6YWI9 AC147366.1-201ENSMUST00000227671 852 ntBASIC10.2□□□□□ -0.78
Ighv1-11A0A0A6YWI9 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC10.2□□□□□ -0.78
Ighv1-11A0A0A6YWI9 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Ighv1-11A0A0A6YWI9 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Ighv1-11A0A0A6YWI9 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Ighv1-11A0A0A6YWI9 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Ighv1-11A0A0A6YWI9 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Ighv1-11A0A0A6YWI9 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Ighv1-11A0A0A6YWI9 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Ighv1-11A0A0A6YWI9 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Ighv1-11A0A0A6YWI9 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Ighv1-11A0A0A6YWI9 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC10.2□□□□□ -0.78
Ighv1-11A0A0A6YWI9 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC10.2□□□□□ -0.78
Ighv1-11A0A0A6YWI9 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Ighv1-11A0A0A6YWI9 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Ighv1-11A0A0A6YWI9 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Ighv1-11A0A0A6YWI9 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC10.2□□□□□ -0.78
Ighv1-11A0A0A6YWI9 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms