Protein–RNA interactions for Protein: Q9Z0D9

Cx3cr1, CX3C chemokine receptor 1, mousemouse

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cx3cr1Q9Z0D9 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Cx3cr1Q9Z0D9 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Cx3cr1Q9Z0D9 Ntrk2-209ENSMUST00000225950 2640 ntBASIC12.24□□□□□ -0.45
Cx3cr1Q9Z0D9 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Cx3cr1Q9Z0D9 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cx3cr1Q9Z0D9 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cx3cr1Q9Z0D9 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Cx3cr1Q9Z0D9 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Cx3cr1Q9Z0D9 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cx3cr1Q9Z0D9 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Cx3cr1Q9Z0D9 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cx3cr1Q9Z0D9 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC12.24□□□□□ -0.45
Cx3cr1Q9Z0D9 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Cx3cr1Q9Z0D9 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC12.24□□□□□ -0.45
Cx3cr1Q9Z0D9 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Cx3cr1Q9Z0D9 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Cx3cr1Q9Z0D9 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cx3cr1Q9Z0D9 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC12.24□□□□□ -0.45
Cx3cr1Q9Z0D9 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cx3cr1Q9Z0D9 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cx3cr1Q9Z0D9 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC12.24□□□□□ -0.45
Cx3cr1Q9Z0D9 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cx3cr1Q9Z0D9 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC12.24□□□□□ -0.45
Cx3cr1Q9Z0D9 AC130669.1-201ENSMUST00000228537 1672 ntBASIC12.24□□□□□ -0.45
Cx3cr1Q9Z0D9 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cx3cr1Q9Z0D9 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cx3cr1Q9Z0D9 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cx3cr1Q9Z0D9 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Cx3cr1Q9Z0D9 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cx3cr1Q9Z0D9 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cx3cr1Q9Z0D9 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Cx3cr1Q9Z0D9 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cx3cr1Q9Z0D9 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cx3cr1Q9Z0D9 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cx3cr1Q9Z0D9 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Cx3cr1Q9Z0D9 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Cx3cr1Q9Z0D9 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Cx3cr1Q9Z0D9 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cx3cr1Q9Z0D9 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Cx3cr1Q9Z0D9 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cx3cr1Q9Z0D9 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cx3cr1Q9Z0D9 Gm45630-201ENSMUST00000210243 1911 ntBASIC12.23□□□□□ -0.45
Cx3cr1Q9Z0D9 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cx3cr1Q9Z0D9 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cx3cr1Q9Z0D9 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cx3cr1Q9Z0D9 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cx3cr1Q9Z0D9 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cx3cr1Q9Z0D9 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Cx3cr1Q9Z0D9 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cx3cr1Q9Z0D9 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Cx3cr1Q9Z0D9 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cx3cr1Q9Z0D9 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cx3cr1Q9Z0D9 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cx3cr1Q9Z0D9 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Cx3cr1Q9Z0D9 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC12.23□□□□□ -0.45
Cx3cr1Q9Z0D9 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Cx3cr1Q9Z0D9 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC12.23□□□□□ -0.45
Cx3cr1Q9Z0D9 Gm13464-201ENSMUST00000119418 935 ntBASIC12.23□□□□□ -0.45
Cx3cr1Q9Z0D9 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Cx3cr1Q9Z0D9 Gm7787-201ENSMUST00000216858 688 ntBASIC12.23□□□□□ -0.45
Cx3cr1Q9Z0D9 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cx3cr1Q9Z0D9 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Cx3cr1Q9Z0D9 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Cx3cr1Q9Z0D9 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cx3cr1Q9Z0D9 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cx3cr1Q9Z0D9 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Cx3cr1Q9Z0D9 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cx3cr1Q9Z0D9 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cx3cr1Q9Z0D9 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Cx3cr1Q9Z0D9 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cx3cr1Q9Z0D9 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cx3cr1Q9Z0D9 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Cx3cr1Q9Z0D9 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
Cx3cr1Q9Z0D9 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Cx3cr1Q9Z0D9 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC12.23□□□□□ -0.45
Cx3cr1Q9Z0D9 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cx3cr1Q9Z0D9 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Cx3cr1Q9Z0D9 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC12.23□□□□□ -0.45
Cx3cr1Q9Z0D9 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cx3cr1Q9Z0D9 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cx3cr1Q9Z0D9 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC12.22□□□□□ -0.45
Cx3cr1Q9Z0D9 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cx3cr1Q9Z0D9 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC12.22□□□□□ -0.45
Cx3cr1Q9Z0D9 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cx3cr1Q9Z0D9 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cx3cr1Q9Z0D9 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC12.22□□□□□ -0.45
Cx3cr1Q9Z0D9 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Cx3cr1Q9Z0D9 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Cx3cr1Q9Z0D9 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cx3cr1Q9Z0D9 Gm3928-201ENSMUST00000121141 1307 ntBASIC12.22□□□□□ -0.45
Cx3cr1Q9Z0D9 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cx3cr1Q9Z0D9 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Cx3cr1Q9Z0D9 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
Cx3cr1Q9Z0D9 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC12.22□□□□□ -0.45
Cx3cr1Q9Z0D9 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC12.22□□□□□ -0.45
Cx3cr1Q9Z0D9 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC12.22□□□□□ -0.45
Cx3cr1Q9Z0D9 AC160338.1-201ENSMUST00000214232 705 ntBASIC12.22□□□□□ -0.45
Cx3cr1Q9Z0D9 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cx3cr1Q9Z0D9 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cx3cr1Q9Z0D9 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 36.2 ms