Protein–RNA interactions for Protein: Q9D9Y8

Ssmem1, RIKEN cDNA 1700025E21, isoform CRA_b, mousemouse

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssmem1Q9D9Y8 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ssmem1Q9D9Y8 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
Ssmem1Q9D9Y8 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC12.49□□□□□ -0.41
Ssmem1Q9D9Y8 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ssmem1Q9D9Y8 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC12.49□□□□□ -0.41
Ssmem1Q9D9Y8 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Ssmem1Q9D9Y8 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Ssmem1Q9D9Y8 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Ssmem1Q9D9Y8 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Ssmem1Q9D9Y8 Gm18766-201ENSMUST00000189811 808 ntBASIC12.49□□□□□ -0.41
Ssmem1Q9D9Y8 Gm29541-201ENSMUST00000191351 678 ntBASIC12.49□□□□□ -0.41
Ssmem1Q9D9Y8 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC12.49□□□□□ -0.41
Ssmem1Q9D9Y8 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ssmem1Q9D9Y8 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ssmem1Q9D9Y8 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ssmem1Q9D9Y8 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC12.49□□□□□ -0.41
Ssmem1Q9D9Y8 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ssmem1Q9D9Y8 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ssmem1Q9D9Y8 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC12.49□□□□□ -0.41
Ssmem1Q9D9Y8 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ssmem1Q9D9Y8 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ssmem1Q9D9Y8 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ssmem1Q9D9Y8 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ssmem1Q9D9Y8 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ssmem1Q9D9Y8 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC12.49□□□□□ -0.41
Ssmem1Q9D9Y8 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Ssmem1Q9D9Y8 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Ssmem1Q9D9Y8 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ssmem1Q9D9Y8 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Ssmem1Q9D9Y8 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Ssmem1Q9D9Y8 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Ssmem1Q9D9Y8 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ssmem1Q9D9Y8 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ssmem1Q9D9Y8 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ssmem1Q9D9Y8 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ssmem1Q9D9Y8 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Ssmem1Q9D9Y8 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ssmem1Q9D9Y8 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Ssmem1Q9D9Y8 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC12.48□□□□□ -0.41
Ssmem1Q9D9Y8 Gm10605-202ENSMUST00000183019 3198 ntBASIC12.48□□□□□ -0.41
Ssmem1Q9D9Y8 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ssmem1Q9D9Y8 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ssmem1Q9D9Y8 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Ssmem1Q9D9Y8 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ssmem1Q9D9Y8 Gm8410-201ENSMUST00000117225 605 ntBASIC12.48□□□□□ -0.41
Ssmem1Q9D9Y8 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC12.48□□□□□ -0.41
Ssmem1Q9D9Y8 Gm13823-201ENSMUST00000119930 345 ntBASIC12.48□□□□□ -0.41
Ssmem1Q9D9Y8 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC12.48□□□□□ -0.41
Ssmem1Q9D9Y8 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Ssmem1Q9D9Y8 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC12.48□□□□□ -0.41
Ssmem1Q9D9Y8 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC12.48□□□□□ -0.41
Ssmem1Q9D9Y8 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ssmem1Q9D9Y8 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Ssmem1Q9D9Y8 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ssmem1Q9D9Y8 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ssmem1Q9D9Y8 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ssmem1Q9D9Y8 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ssmem1Q9D9Y8 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ssmem1Q9D9Y8 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ssmem1Q9D9Y8 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ssmem1Q9D9Y8 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ssmem1Q9D9Y8 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ssmem1Q9D9Y8 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ssmem1Q9D9Y8 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ssmem1Q9D9Y8 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Ssmem1Q9D9Y8 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ssmem1Q9D9Y8 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Ssmem1Q9D9Y8 Gm9252-201ENSMUST00000172364 1602 ntBASIC12.48□□□□□ -0.41
Ssmem1Q9D9Y8 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ssmem1Q9D9Y8 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ssmem1Q9D9Y8 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC12.47□□□□□ -0.41
Ssmem1Q9D9Y8 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ssmem1Q9D9Y8 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ssmem1Q9D9Y8 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ssmem1Q9D9Y8 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC12.47□□□□□ -0.41
Ssmem1Q9D9Y8 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ssmem1Q9D9Y8 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Ssmem1Q9D9Y8 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Ssmem1Q9D9Y8 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
Ssmem1Q9D9Y8 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Ssmem1Q9D9Y8 Gm14042-201ENSMUST00000120139 833 ntBASIC12.47□□□□□ -0.41
Ssmem1Q9D9Y8 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Ssmem1Q9D9Y8 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Ssmem1Q9D9Y8 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC12.47□□□□□ -0.41
Ssmem1Q9D9Y8 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC12.47□□□□□ -0.41
Ssmem1Q9D9Y8 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ssmem1Q9D9Y8 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC12.47□□□□□ -0.41
Ssmem1Q9D9Y8 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Ssmem1Q9D9Y8 Gm29310-201ENSMUST00000185468 696 ntBASIC12.47□□□□□ -0.41
Ssmem1Q9D9Y8 Gm21825-201ENSMUST00000185728 696 ntBASIC12.47□□□□□ -0.41
Ssmem1Q9D9Y8 Gm29109-201ENSMUST00000185895 696 ntBASIC12.47□□□□□ -0.41
Ssmem1Q9D9Y8 Gm21896-201ENSMUST00000186520 696 ntBASIC12.47□□□□□ -0.41
Ssmem1Q9D9Y8 Gm21873-201ENSMUST00000186728 696 ntBASIC12.47□□□□□ -0.41
Ssmem1Q9D9Y8 Gm21794-201ENSMUST00000187056 696 ntBASIC12.47□□□□□ -0.41
Ssmem1Q9D9Y8 Gm21880-201ENSMUST00000187275 696 ntBASIC12.47□□□□□ -0.41
Ssmem1Q9D9Y8 Gm21826-201ENSMUST00000187451 696 ntBASIC12.47□□□□□ -0.41
Ssmem1Q9D9Y8 Gm21198-201ENSMUST00000188393 696 ntBASIC12.47□□□□□ -0.41
Ssmem1Q9D9Y8 Gm21749-201ENSMUST00000189343 696 ntBASIC12.47□□□□□ -0.41
Ssmem1Q9D9Y8 Gm21901-201ENSMUST00000189568 696 ntBASIC12.47□□□□□ -0.41
Ssmem1Q9D9Y8 Gm29424-201ENSMUST00000189716 696 ntBASIC12.47□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms