Protein–RNA interactions for Protein: Q9D2H5

Trim42, Tripartite motif-containing protein 42, mousemouse

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim42Q9D2H5 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Trim42Q9D2H5 Adam22-203ENSMUST00000088744 9245 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Trim42Q9D2H5 AC166491.1-201ENSMUST00000227053 2308 ntBASIC14.48□□□□□ -0.09
Trim42Q9D2H5 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trim42Q9D2H5 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trim42Q9D2H5 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trim42Q9D2H5 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trim42Q9D2H5 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Trim42Q9D2H5 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trim42Q9D2H5 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trim42Q9D2H5 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trim42Q9D2H5 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trim42Q9D2H5 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Trim42Q9D2H5 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Trim42Q9D2H5 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trim42Q9D2H5 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trim42Q9D2H5 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trim42Q9D2H5 Gm14451-201ENSMUST00000121581 1542 ntBASIC14.47□□□□□ -0.09
Trim42Q9D2H5 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Trim42Q9D2H5 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Trim42Q9D2H5 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Trim42Q9D2H5 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trim42Q9D2H5 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
Trim42Q9D2H5 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trim42Q9D2H5 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Trim42Q9D2H5 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC14.47□□□□□ -0.09
Trim42Q9D2H5 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trim42Q9D2H5 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC14.47□□□□□ -0.09
Trim42Q9D2H5 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
Trim42Q9D2H5 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Trim42Q9D2H5 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Trim42Q9D2H5 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC14.47□□□□□ -0.09
Trim42Q9D2H5 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Trim42Q9D2H5 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trim42Q9D2H5 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trim42Q9D2H5 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trim42Q9D2H5 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC14.47□□□□□ -0.09
Trim42Q9D2H5 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trim42Q9D2H5 Gm37844-201ENSMUST00000192473 4097 ntBASIC14.46□□□□□ -0.09
Trim42Q9D2H5 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trim42Q9D2H5 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trim42Q9D2H5 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Trim42Q9D2H5 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trim42Q9D2H5 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trim42Q9D2H5 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Trim42Q9D2H5 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Trim42Q9D2H5 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Trim42Q9D2H5 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC14.46□□□□□ -0.09
Trim42Q9D2H5 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Trim42Q9D2H5 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Trim42Q9D2H5 AA414768-201ENSMUST00000121924 1257 ntBASIC14.46□□□□□ -0.09
Trim42Q9D2H5 Gm6728-201ENSMUST00000178117 1065 ntBASIC14.46□□□□□ -0.09
Trim42Q9D2H5 Gm27867-201ENSMUST00000184778 125 ntBASIC14.46□□□□□ -0.09
Trim42Q9D2H5 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trim42Q9D2H5 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trim42Q9D2H5 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Trim42Q9D2H5 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trim42Q9D2H5 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Trim42Q9D2H5 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Trim42Q9D2H5 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC14.46□□□□□ -0.1
Trim42Q9D2H5 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Trim42Q9D2H5 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
Trim42Q9D2H5 Ptprr-204ENSMUST00000128399 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
Trim42Q9D2H5 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Trim42Q9D2H5 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Trim42Q9D2H5 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.1
Trim42Q9D2H5 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Trim42Q9D2H5 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trim42Q9D2H5 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC14.45□□□□□ -0.1
Trim42Q9D2H5 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trim42Q9D2H5 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trim42Q9D2H5 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trim42Q9D2H5 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trim42Q9D2H5 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Trim42Q9D2H5 Olfr129-201ENSMUST00000122318 993 ntBASIC14.45□□□□□ -0.1
Trim42Q9D2H5 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
Trim42Q9D2H5 Gm27742-201ENSMUST00000184667 60 ntBASIC14.45□□□□□ -0.1
Trim42Q9D2H5 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trim42Q9D2H5 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Trim42Q9D2H5 AC155729.1-201ENSMUST00000227758 544 ntBASIC14.45□□□□□ -0.1
Trim42Q9D2H5 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Trim42Q9D2H5 Armcx1-201ENSMUST00000035748 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trim42Q9D2H5 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trim42Q9D2H5 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trim42Q9D2H5 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trim42Q9D2H5 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trim42Q9D2H5 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trim42Q9D2H5 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trim42Q9D2H5 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Trim42Q9D2H5 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trim42Q9D2H5 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trim42Q9D2H5 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
Trim42Q9D2H5 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trim42Q9D2H5 Slc33a1-201ENSMUST00000029402 3150 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trim42Q9D2H5 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trim42Q9D2H5 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Trim42Q9D2H5 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trim42Q9D2H5 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trim42Q9D2H5 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trim42Q9D2H5 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 45.3 ms