Protein–RNA interactions for Protein: Q9CZ83

Mrpl55, 39S ribosomal protein L55, mitochondrial, mousemouse

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mrpl55Q9CZ83 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC9.6□□□□□ -0.87
Mrpl55Q9CZ83 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Mrpl55Q9CZ83 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Mrpl55Q9CZ83 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC9.6□□□□□ -0.87
Mrpl55Q9CZ83 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC9.6□□□□□ -0.87
Mrpl55Q9CZ83 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC9.6□□□□□ -0.87
Mrpl55Q9CZ83 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Mrpl55Q9CZ83 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Mrpl55Q9CZ83 Tenm3-206ENSMUST00000190840 8663 ntAPPRIS ALT1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Mrpl55Q9CZ83 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Mrpl55Q9CZ83 Nckap5l-201ENSMUST00000023747 4853 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Mrpl55Q9CZ83 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC9.6□□□□□ -0.87
Mrpl55Q9CZ83 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Mrpl55Q9CZ83 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Mrpl55Q9CZ83 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Mrpl55Q9CZ83 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC9.59□□□□□ -0.87
Mrpl55Q9CZ83 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Mrpl55Q9CZ83 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Mrpl55Q9CZ83 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Mrpl55Q9CZ83 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Mrpl55Q9CZ83 Srgap3-202ENSMUST00000088373 8887 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Mrpl55Q9CZ83 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC9.59□□□□□ -0.87
Mrpl55Q9CZ83 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Mrpl55Q9CZ83 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC9.59□□□□□ -0.87
Mrpl55Q9CZ83 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Mrpl55Q9CZ83 Plekhg2-201ENSMUST00000094644 4623 ntAPPRIS P3 TSL 1 (best) BASIC9.59□□□□□ -0.87
Mrpl55Q9CZ83 Derl2-202ENSMUST00000108523 884 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Mrpl55Q9CZ83 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC9.59□□□□□ -0.87
Mrpl55Q9CZ83 Gm6184-201ENSMUST00000120403 1261 ntBASIC9.59□□□□□ -0.87
Mrpl55Q9CZ83 Gm12350-201ENSMUST00000121208 462 ntBASIC9.59□□□□□ -0.87
Mrpl55Q9CZ83 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC9.59□□□□□ -0.87
Mrpl55Q9CZ83 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC9.59□□□□□ -0.87
Mrpl55Q9CZ83 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC9.59□□□□□ -0.87
Mrpl55Q9CZ83 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC9.59□□□□□ -0.87
Mrpl55Q9CZ83 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC9.59□□□□□ -0.87
Mrpl55Q9CZ83 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Mrpl55Q9CZ83 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC9.59□□□□□ -0.87
Mrpl55Q9CZ83 Abca7-201ENSMUST00000043866 6590 ntAPPRIS P3 TSL 1 (best) BASIC9.59□□□□□ -0.87
Mrpl55Q9CZ83 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Mrpl55Q9CZ83 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Mrpl55Q9CZ83 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC9.59□□□□□ -0.87
Mrpl55Q9CZ83 Xndc1-201ENSMUST00000094130 2298 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Mrpl55Q9CZ83 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC9.59□□□□□ -0.87
Mrpl55Q9CZ83 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC9.59□□□□□ -0.87
Mrpl55Q9CZ83 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Mrpl55Q9CZ83 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Mrpl55Q9CZ83 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC9.59□□□□□ -0.87
Mrpl55Q9CZ83 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC9.59□□□□□ -0.87
Mrpl55Q9CZ83 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Mrpl55Q9CZ83 Thsd4-202ENSMUST00000098660 8796 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Mrpl55Q9CZ83 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Mrpl55Q9CZ83 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Mrpl55Q9CZ83 Ankrd52-201ENSMUST00000014642 6620 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Mrpl55Q9CZ83 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Mrpl55Q9CZ83 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Mrpl55Q9CZ83 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Mrpl55Q9CZ83 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC9.59□□□□□ -0.87
Mrpl55Q9CZ83 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Mrpl55Q9CZ83 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC9.59□□□□□ -0.88
Mrpl55Q9CZ83 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC9.58□□□□□ -0.88
Mrpl55Q9CZ83 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Mrpl55Q9CZ83 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC9.58□□□□□ -0.88
Mrpl55Q9CZ83 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC9.58□□□□□ -0.88
Mrpl55Q9CZ83 Gm3928-201ENSMUST00000121141 1307 ntBASIC9.58□□□□□ -0.88
Mrpl55Q9CZ83 AC154527.4-201ENSMUST00000224364 1667 ntBASIC9.58□□□□□ -0.88
Mrpl55Q9CZ83 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Mrpl55Q9CZ83 Cadm1-203ENSMUST00000114547 4444 ntAPPRIS P4 TSL 1 (best) BASIC9.58□□□□□ -0.88
Mrpl55Q9CZ83 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Mrpl55Q9CZ83 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC9.58□□□□□ -0.88
Mrpl55Q9CZ83 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC9.58□□□□□ -0.88
Mrpl55Q9CZ83 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Mrpl55Q9CZ83 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Mrpl55Q9CZ83 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Mrpl55Q9CZ83 Plcd4-205ENSMUST00000113749 4648 ntAPPRIS ALT2 TSL 5 BASIC9.58□□□□□ -0.88
Mrpl55Q9CZ83 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Mrpl55Q9CZ83 Xpot-203ENSMUST00000218004 6005 ntAPPRIS P1 TSL 5 BASIC9.58□□□□□ -0.88
Mrpl55Q9CZ83 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Mrpl55Q9CZ83 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Mrpl55Q9CZ83 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC9.58□□□□□ -0.88
Mrpl55Q9CZ83 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Mrpl55Q9CZ83 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC9.58□□□□□ -0.88
Mrpl55Q9CZ83 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Mrpl55Q9CZ83 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC9.58□□□□□ -0.88
Mrpl55Q9CZ83 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC9.58□□□□□ -0.88
Mrpl55Q9CZ83 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC9.58□□□□□ -0.88
Mrpl55Q9CZ83 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC9.58□□□□□ -0.88
Mrpl55Q9CZ83 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC9.58□□□□□ -0.88
Mrpl55Q9CZ83 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC9.58□□□□□ -0.88
Mrpl55Q9CZ83 Gm8000-201ENSMUST00000188378 592 ntBASIC9.58□□□□□ -0.88
Mrpl55Q9CZ83 Gm5364-201ENSMUST00000216789 889 ntBASIC9.58□□□□□ -0.88
Mrpl55Q9CZ83 Gm18622-201ENSMUST00000219361 595 ntBASIC9.58□□□□□ -0.88
Mrpl55Q9CZ83 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Mrpl55Q9CZ83 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Mrpl55Q9CZ83 Tmem215-201ENSMUST00000049655 4733 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Mrpl55Q9CZ83 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Mrpl55Q9CZ83 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC9.58□□□□□ -0.88
Mrpl55Q9CZ83 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC9.58□□□□□ -0.88
Mrpl55Q9CZ83 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Mrpl55Q9CZ83 Gm4755-201ENSMUST00000181803 2647 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Mrpl55Q9CZ83 Pcdhb16-201ENSMUST00000051442 5225 ntAPPRIS P1 BASIC9.58□□□□□ -0.88
Retrieved 100 of 76,532 protein–RNA pairs in 57 ms