Protein–RNA interactions for Protein: Q9CYB0

Trim13, E3 ubiquitin-protein ligase TRIM13, mousemouse

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim13Q9CYB0 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Trim13Q9CYB0 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trim13Q9CYB0 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Trim13Q9CYB0 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Trim13Q9CYB0 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trim13Q9CYB0 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC13.38□□□□□ -0.27
Trim13Q9CYB0 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Trim13Q9CYB0 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC13.38□□□□□ -0.27
Trim13Q9CYB0 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Trim13Q9CYB0 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trim13Q9CYB0 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Trim13Q9CYB0 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trim13Q9CYB0 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trim13Q9CYB0 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trim13Q9CYB0 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trim13Q9CYB0 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trim13Q9CYB0 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC13.37□□□□□ -0.27
Trim13Q9CYB0 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trim13Q9CYB0 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Trim13Q9CYB0 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Trim13Q9CYB0 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Trim13Q9CYB0 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trim13Q9CYB0 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Trim13Q9CYB0 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trim13Q9CYB0 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trim13Q9CYB0 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Trim13Q9CYB0 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trim13Q9CYB0 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Trim13Q9CYB0 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trim13Q9CYB0 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Trim13Q9CYB0 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Trim13Q9CYB0 Gm12644-201ENSMUST00000119935 606 ntBASIC13.37□□□□□ -0.27
Trim13Q9CYB0 Gm11780-201ENSMUST00000136880 516 ntBASIC13.37□□□□□ -0.27
Trim13Q9CYB0 Gm2308-201ENSMUST00000166539 1004 ntBASIC13.37□□□□□ -0.27
Trim13Q9CYB0 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC13.37□□□□□ -0.27
Trim13Q9CYB0 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC13.37□□□□□ -0.27
Trim13Q9CYB0 Gm37584-201ENSMUST00000193595 1290 ntBASIC13.37□□□□□ -0.27
Trim13Q9CYB0 Gm42790-201ENSMUST00000201268 969 ntBASIC13.37□□□□□ -0.27
Trim13Q9CYB0 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC13.37□□□□□ -0.27
Trim13Q9CYB0 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC13.37□□□□□ -0.27
Trim13Q9CYB0 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC13.37□□□□□ -0.27
Trim13Q9CYB0 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trim13Q9CYB0 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC13.37□□□□□ -0.27
Trim13Q9CYB0 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trim13Q9CYB0 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trim13Q9CYB0 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trim13Q9CYB0 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC13.37□□□□□ -0.27
Trim13Q9CYB0 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Trim13Q9CYB0 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Trim13Q9CYB0 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trim13Q9CYB0 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trim13Q9CYB0 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC13.37□□□□□ -0.27
Trim13Q9CYB0 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trim13Q9CYB0 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC13.36□□□□□ -0.27
Trim13Q9CYB0 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim13Q9CYB0 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim13Q9CYB0 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim13Q9CYB0 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim13Q9CYB0 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Trim13Q9CYB0 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim13Q9CYB0 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim13Q9CYB0 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC13.36□□□□□ -0.27
Trim13Q9CYB0 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim13Q9CYB0 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC13.36□□□□□ -0.27
Trim13Q9CYB0 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim13Q9CYB0 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Trim13Q9CYB0 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim13Q9CYB0 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim13Q9CYB0 Gm11185-201ENSMUST00000117732 1007 ntBASIC13.36□□□□□ -0.27
Trim13Q9CYB0 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Trim13Q9CYB0 Gm18489-201ENSMUST00000172565 551 ntBASIC13.36□□□□□ -0.27
Trim13Q9CYB0 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
Trim13Q9CYB0 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Trim13Q9CYB0 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Trim13Q9CYB0 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim13Q9CYB0 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim13Q9CYB0 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim13Q9CYB0 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim13Q9CYB0 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim13Q9CYB0 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim13Q9CYB0 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim13Q9CYB0 Gm28182-201ENSMUST00000188354 2477 ntBASIC13.36□□□□□ -0.27
Trim13Q9CYB0 AC166574.6-201ENSMUST00000227889 1806 ntBASIC13.36□□□□□ -0.27
Trim13Q9CYB0 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Trim13Q9CYB0 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim13Q9CYB0 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim13Q9CYB0 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim13Q9CYB0 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC13.36□□□□□ -0.27
Trim13Q9CYB0 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim13Q9CYB0 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim13Q9CYB0 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim13Q9CYB0 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim13Q9CYB0 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim13Q9CYB0 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim13Q9CYB0 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim13Q9CYB0 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC13.36□□□□□ -0.27
Trim13Q9CYB0 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim13Q9CYB0 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim13Q9CYB0 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim13Q9CYB0 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms