Protein–RNA interactions for Protein: Q9CY97

Ssu72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, mousemouse

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssu72Q9CY97 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Ssu72Q9CY97 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ssu72Q9CY97 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ssu72Q9CY97 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ssu72Q9CY97 AC122901.1-201ENSMUST00000214203 1790 ntBASIC14.34□□□□□ -0.11
Ssu72Q9CY97 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ssu72Q9CY97 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ssu72Q9CY97 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Ssu72Q9CY97 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Ssu72Q9CY97 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ssu72Q9CY97 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ssu72Q9CY97 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ssu72Q9CY97 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Ssu72Q9CY97 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ssu72Q9CY97 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ssu72Q9CY97 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Ssu72Q9CY97 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ssu72Q9CY97 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Ssu72Q9CY97 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Ssu72Q9CY97 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC14.34□□□□□ -0.11
Ssu72Q9CY97 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC14.34□□□□□ -0.11
Ssu72Q9CY97 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Ssu72Q9CY97 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Ssu72Q9CY97 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Ssu72Q9CY97 Gm17807-201ENSMUST00000186869 298 ntBASIC14.34□□□□□ -0.11
Ssu72Q9CY97 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC14.34□□□□□ -0.11
Ssu72Q9CY97 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC14.34□□□□□ -0.11
Ssu72Q9CY97 Gm37230-201ENSMUST00000194491 818 ntBASIC14.34□□□□□ -0.11
Ssu72Q9CY97 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ssu72Q9CY97 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ssu72Q9CY97 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC14.34□□□□□ -0.11
Ssu72Q9CY97 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ssu72Q9CY97 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Ssu72Q9CY97 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ssu72Q9CY97 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Ssu72Q9CY97 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ssu72Q9CY97 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ssu72Q9CY97 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ssu72Q9CY97 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ssu72Q9CY97 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ssu72Q9CY97 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ssu72Q9CY97 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC14.33□□□□□ -0.11
Ssu72Q9CY97 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.11
Ssu72Q9CY97 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Ssu72Q9CY97 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Ssu72Q9CY97 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Ssu72Q9CY97 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ssu72Q9CY97 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ssu72Q9CY97 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ssu72Q9CY97 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ssu72Q9CY97 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ssu72Q9CY97 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ssu72Q9CY97 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Ssu72Q9CY97 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Ssu72Q9CY97 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ssu72Q9CY97 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Ssu72Q9CY97 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Ssu72Q9CY97 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC14.33□□□□□ -0.12
Ssu72Q9CY97 Gm18041-201ENSMUST00000218210 618 ntBASIC14.33□□□□□ -0.12
Ssu72Q9CY97 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Ssu72Q9CY97 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC14.33□□□□□ -0.12
Ssu72Q9CY97 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ssu72Q9CY97 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ssu72Q9CY97 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ssu72Q9CY97 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ssu72Q9CY97 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ssu72Q9CY97 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ssu72Q9CY97 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ssu72Q9CY97 Gm45003-201ENSMUST00000205875 2158 ntBASIC14.33□□□□□ -0.12
Ssu72Q9CY97 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Ssu72Q9CY97 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ssu72Q9CY97 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ssu72Q9CY97 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ssu72Q9CY97 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ssu72Q9CY97 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Ssu72Q9CY97 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ssu72Q9CY97 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ssu72Q9CY97 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Ssu72Q9CY97 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ssu72Q9CY97 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ssu72Q9CY97 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ssu72Q9CY97 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ssu72Q9CY97 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Ssu72Q9CY97 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ssu72Q9CY97 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC14.32□□□□□ -0.12
Ssu72Q9CY97 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC14.32□□□□□ -0.12
Ssu72Q9CY97 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ssu72Q9CY97 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ssu72Q9CY97 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Ssu72Q9CY97 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Ssu72Q9CY97 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ssu72Q9CY97 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ssu72Q9CY97 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ssu72Q9CY97 Gm16026-204ENSMUST00000162652 683 ntBASIC14.32□□□□□ -0.12
Ssu72Q9CY97 Gm7230-201ENSMUST00000173026 815 ntBASIC14.32□□□□□ -0.12
Ssu72Q9CY97 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Ssu72Q9CY97 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC14.32□□□□□ -0.12
Ssu72Q9CY97 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Ssu72Q9CY97 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Ssu72Q9CY97 Spr-ps1-201ENSMUST00000089584 605 ntBASIC14.32□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 57.1 ms