Protein–RNA interactions for Protein: Q9CSV6

Sft2d3, Vesicle transport protein SFT2C, mousemouse

Predictions only

Length 209 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sft2d3Q9CSV6 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sft2d3Q9CSV6 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC12.34□□□□□ -0.43
Sft2d3Q9CSV6 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
Sft2d3Q9CSV6 Gm15920-201ENSMUST00000118998 402 ntBASIC12.34□□□□□ -0.43
Sft2d3Q9CSV6 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC12.34□□□□□ -0.43
Sft2d3Q9CSV6 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC12.34□□□□□ -0.43
Sft2d3Q9CSV6 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Sft2d3Q9CSV6 Gm37171-201ENSMUST00000192636 1185 ntBASIC12.34□□□□□ -0.43
Sft2d3Q9CSV6 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC12.34□□□□□ -0.43
Sft2d3Q9CSV6 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC12.34□□□□□ -0.43
Sft2d3Q9CSV6 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC12.34□□□□□ -0.43
Sft2d3Q9CSV6 CT009510.1-201ENSMUST00000227972 270 ntBASIC12.34□□□□□ -0.43
Sft2d3Q9CSV6 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Sft2d3Q9CSV6 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Sft2d3Q9CSV6 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sft2d3Q9CSV6 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sft2d3Q9CSV6 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sft2d3Q9CSV6 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC12.34□□□□□ -0.43
Sft2d3Q9CSV6 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sft2d3Q9CSV6 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sft2d3Q9CSV6 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sft2d3Q9CSV6 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sft2d3Q9CSV6 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Sft2d3Q9CSV6 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sft2d3Q9CSV6 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Sft2d3Q9CSV6 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sft2d3Q9CSV6 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Sft2d3Q9CSV6 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sft2d3Q9CSV6 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC12.34□□□□□ -0.43
Sft2d3Q9CSV6 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sft2d3Q9CSV6 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC12.34□□□□□ -0.43
Sft2d3Q9CSV6 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC12.34□□□□□ -0.43
Sft2d3Q9CSV6 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Sft2d3Q9CSV6 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC12.33□□□□□ -0.43
Sft2d3Q9CSV6 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC12.33□□□□□ -0.43
Sft2d3Q9CSV6 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC12.33□□□□□ -0.43
Sft2d3Q9CSV6 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC12.33□□□□□ -0.43
Sft2d3Q9CSV6 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.43
Sft2d3Q9CSV6 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC12.33□□□□□ -0.43
Sft2d3Q9CSV6 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Sft2d3Q9CSV6 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Sft2d3Q9CSV6 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Sft2d3Q9CSV6 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Sft2d3Q9CSV6 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC12.33□□□□□ -0.44
Sft2d3Q9CSV6 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Sft2d3Q9CSV6 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Sft2d3Q9CSV6 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Sft2d3Q9CSV6 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Sft2d3Q9CSV6 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC12.33□□□□□ -0.44
Sft2d3Q9CSV6 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC12.33□□□□□ -0.44
Sft2d3Q9CSV6 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC12.33□□□□□ -0.44
Sft2d3Q9CSV6 Gm12017-201ENSMUST00000122453 1003 ntBASIC12.33□□□□□ -0.44
Sft2d3Q9CSV6 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Sft2d3Q9CSV6 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Sft2d3Q9CSV6 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC12.33□□□□□ -0.44
Sft2d3Q9CSV6 Gm5312-201ENSMUST00000203728 547 ntBASIC12.33□□□□□ -0.44
Sft2d3Q9CSV6 Gm20553-201ENSMUST00000204205 844 ntBASIC12.33□□□□□ -0.44
Sft2d3Q9CSV6 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC12.33□□□□□ -0.44
Sft2d3Q9CSV6 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC12.33□□□□□ -0.44
Sft2d3Q9CSV6 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC12.33□□□□□ -0.44
Sft2d3Q9CSV6 CT025555.1-201ENSMUST00000225901 1217 ntBASIC12.33□□□□□ -0.44
Sft2d3Q9CSV6 AC154621.1-201ENSMUST00000226155 1119 ntBASIC12.33□□□□□ -0.44
Sft2d3Q9CSV6 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Sft2d3Q9CSV6 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Sft2d3Q9CSV6 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Sft2d3Q9CSV6 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Sft2d3Q9CSV6 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Sft2d3Q9CSV6 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Sft2d3Q9CSV6 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
Sft2d3Q9CSV6 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Sft2d3Q9CSV6 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Sft2d3Q9CSV6 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Sft2d3Q9CSV6 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Sft2d3Q9CSV6 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Sft2d3Q9CSV6 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Sft2d3Q9CSV6 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Sft2d3Q9CSV6 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Sft2d3Q9CSV6 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Sft2d3Q9CSV6 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Sft2d3Q9CSV6 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Sft2d3Q9CSV6 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Sft2d3Q9CSV6 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Sft2d3Q9CSV6 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Sft2d3Q9CSV6 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Sft2d3Q9CSV6 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Sft2d3Q9CSV6 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC12.32□□□□□ -0.44
Sft2d3Q9CSV6 Gm23547-201ENSMUST00000158210 271 ntBASIC12.32□□□□□ -0.44
Sft2d3Q9CSV6 Gm18889-201ENSMUST00000174284 929 ntBASIC12.32□□□□□ -0.44
Sft2d3Q9CSV6 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC12.32□□□□□ -0.44
Sft2d3Q9CSV6 Mir6990-201ENSMUST00000183724 91 ntBASIC12.32□□□□□ -0.44
Sft2d3Q9CSV6 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Sft2d3Q9CSV6 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Sft2d3Q9CSV6 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC12.32□□□□□ -0.44
Sft2d3Q9CSV6 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
Sft2d3Q9CSV6 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Sft2d3Q9CSV6 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Sft2d3Q9CSV6 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Sft2d3Q9CSV6 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC12.32□□□□□ -0.44
Sft2d3Q9CSV6 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Sft2d3Q9CSV6 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 70.6 ms