Protein–RNA interactions for Protein: Q99PJ2

Trim8, Probable E3 ubiquitin-protein ligase TRIM8, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim8Q99PJ2 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim8Q99PJ2 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Trim8Q99PJ2 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim8Q99PJ2 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Trim8Q99PJ2 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim8Q99PJ2 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim8Q99PJ2 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim8Q99PJ2 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC14.18□□□□□ -0.14
Trim8Q99PJ2 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Trim8Q99PJ2 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim8Q99PJ2 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC14.18□□□□□ -0.14
Trim8Q99PJ2 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Trim8Q99PJ2 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Trim8Q99PJ2 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim8Q99PJ2 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim8Q99PJ2 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Trim8Q99PJ2 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Trim8Q99PJ2 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Trim8Q99PJ2 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC14.18□□□□□ -0.14
Trim8Q99PJ2 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Trim8Q99PJ2 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim8Q99PJ2 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim8Q99PJ2 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC14.18□□□□□ -0.14
Trim8Q99PJ2 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim8Q99PJ2 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Trim8Q99PJ2 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim8Q99PJ2 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim8Q99PJ2 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim8Q99PJ2 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim8Q99PJ2 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Trim8Q99PJ2 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC14.18□□□□□ -0.14
Trim8Q99PJ2 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim8Q99PJ2 Mypopos-202ENSMUST00000205975 2321 ntBASIC14.18□□□□□ -0.14
Trim8Q99PJ2 Zeb2-211ENSMUST00000153561 2070 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Trim8Q99PJ2 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim8Q99PJ2 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim8Q99PJ2 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim8Q99PJ2 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Trim8Q99PJ2 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Trim8Q99PJ2 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim8Q99PJ2 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim8Q99PJ2 Olfr482-202ENSMUST00000217304 2612 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Trim8Q99PJ2 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim8Q99PJ2 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Trim8Q99PJ2 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim8Q99PJ2 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim8Q99PJ2 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim8Q99PJ2 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim8Q99PJ2 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC14.17□□□□□ -0.14
Trim8Q99PJ2 Gm7222-201ENSMUST00000117512 906 ntBASIC14.17□□□□□ -0.14
Trim8Q99PJ2 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Trim8Q99PJ2 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim8Q99PJ2 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim8Q99PJ2 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Trim8Q99PJ2 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Trim8Q99PJ2 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim8Q99PJ2 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim8Q99PJ2 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim8Q99PJ2 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Trim8Q99PJ2 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim8Q99PJ2 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim8Q99PJ2 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim8Q99PJ2 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Trim8Q99PJ2 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Trim8Q99PJ2 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim8Q99PJ2 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
Trim8Q99PJ2 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Trim8Q99PJ2 AC166491.1-201ENSMUST00000227053 2308 ntBASIC14.16□□□□□ -0.14
Trim8Q99PJ2 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim8Q99PJ2 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Trim8Q99PJ2 AC119177.1-201ENSMUST00000227647 1332 ntBASIC14.16□□□□□ -0.14
Trim8Q99PJ2 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim8Q99PJ2 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Trim8Q99PJ2 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim8Q99PJ2 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim8Q99PJ2 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim8Q99PJ2 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim8Q99PJ2 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim8Q99PJ2 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim8Q99PJ2 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim8Q99PJ2 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Trim8Q99PJ2 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC14.16□□□□□ -0.14
Trim8Q99PJ2 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC14.16□□□□□ -0.14
Trim8Q99PJ2 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC14.16□□□□□ -0.14
Trim8Q99PJ2 Gm7787-201ENSMUST00000216858 688 ntBASIC14.16□□□□□ -0.14
Trim8Q99PJ2 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC14.16□□□□□ -0.14
Trim8Q99PJ2 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim8Q99PJ2 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Trim8Q99PJ2 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Trim8Q99PJ2 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim8Q99PJ2 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim8Q99PJ2 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim8Q99PJ2 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim8Q99PJ2 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
Trim8Q99PJ2 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Trim8Q99PJ2 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim8Q99PJ2 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Trim8Q99PJ2 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim8Q99PJ2 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Trim8Q99PJ2 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 51.3 ms