Protein–RNA interactions for Protein: Q99LM2

Cdk5rap3, CDK5 regulatory subunit-associated protein 3, mousemouse

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk5rap3Q99LM2 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cdk5rap3Q99LM2 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
Cdk5rap3Q99LM2 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cdk5rap3Q99LM2 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cdk5rap3Q99LM2 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cdk5rap3Q99LM2 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cdk5rap3Q99LM2 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cdk5rap3Q99LM2 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cdk5rap3Q99LM2 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cdk5rap3Q99LM2 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
Cdk5rap3Q99LM2 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cdk5rap3Q99LM2 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cdk5rap3Q99LM2 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Cdk5rap3Q99LM2 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cdk5rap3Q99LM2 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cdk5rap3Q99LM2 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
Cdk5rap3Q99LM2 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Cdk5rap3Q99LM2 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
Cdk5rap3Q99LM2 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cdk5rap3Q99LM2 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC14.98□□□□□ -0.01
Cdk5rap3Q99LM2 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Cdk5rap3Q99LM2 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Cdk5rap3Q99LM2 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC14.98□□□□□ -0.01
Cdk5rap3Q99LM2 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
Cdk5rap3Q99LM2 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC14.98□□□□□ -0.01
Cdk5rap3Q99LM2 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC14.98□□□□□ -0.01
Cdk5rap3Q99LM2 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
Cdk5rap3Q99LM2 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC14.98□□□□□ -0.01
Cdk5rap3Q99LM2 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC14.98□□□□□ -0.01
Cdk5rap3Q99LM2 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Cdk5rap3Q99LM2 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cdk5rap3Q99LM2 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC14.98□□□□□ -0.01
Cdk5rap3Q99LM2 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Cdk5rap3Q99LM2 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cdk5rap3Q99LM2 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cdk5rap3Q99LM2 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cdk5rap3Q99LM2 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC14.98□□□□□ -0.01
Cdk5rap3Q99LM2 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
Cdk5rap3Q99LM2 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC14.98□□□□□ -0.01
Cdk5rap3Q99LM2 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cdk5rap3Q99LM2 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cdk5rap3Q99LM2 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cdk5rap3Q99LM2 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Cdk5rap3Q99LM2 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cdk5rap3Q99LM2 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cdk5rap3Q99LM2 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cdk5rap3Q99LM2 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cdk5rap3Q99LM2 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cdk5rap3Q99LM2 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Cdk5rap3Q99LM2 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC14.97□□□□□ -0.01
Cdk5rap3Q99LM2 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cdk5rap3Q99LM2 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cdk5rap3Q99LM2 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cdk5rap3Q99LM2 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cdk5rap3Q99LM2 Gm16198-201ENSMUST00000118766 670 ntBASIC14.97□□□□□ -0.01
Cdk5rap3Q99LM2 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC14.97□□□□□ -0.01
Cdk5rap3Q99LM2 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cdk5rap3Q99LM2 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC14.97□□□□□ -0.01
Cdk5rap3Q99LM2 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC14.97□□□□□ -0.01
Cdk5rap3Q99LM2 Gm18195-201ENSMUST00000207604 706 ntBASIC14.97□□□□□ -0.01
Cdk5rap3Q99LM2 AC130671.1-201ENSMUST00000227384 1237 ntBASIC14.97□□□□□ -0.01
Cdk5rap3Q99LM2 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC14.97□□□□□ -0.01
Cdk5rap3Q99LM2 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cdk5rap3Q99LM2 Gm45630-201ENSMUST00000210243 1911 ntBASIC14.97□□□□□ -0.01
Cdk5rap3Q99LM2 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cdk5rap3Q99LM2 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cdk5rap3Q99LM2 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cdk5rap3Q99LM2 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Cdk5rap3Q99LM2 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cdk5rap3Q99LM2 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Cdk5rap3Q99LM2 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Cdk5rap3Q99LM2 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Cdk5rap3Q99LM2 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Cdk5rap3Q99LM2 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Cdk5rap3Q99LM2 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Cdk5rap3Q99LM2 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Cdk5rap3Q99LM2 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Cdk5rap3Q99LM2 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Cdk5rap3Q99LM2 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC14.96□□□□□ -0.01
Cdk5rap3Q99LM2 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC14.96□□□□□ -0.01
Cdk5rap3Q99LM2 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
Cdk5rap3Q99LM2 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Cdk5rap3Q99LM2 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC14.96□□□□□ -0.01
Cdk5rap3Q99LM2 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Cdk5rap3Q99LM2 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Cdk5rap3Q99LM2 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Cdk5rap3Q99LM2 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Cdk5rap3Q99LM2 AC154527.4-201ENSMUST00000224364 1667 ntBASIC14.96□□□□□ -0.01
Cdk5rap3Q99LM2 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Cdk5rap3Q99LM2 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Cdk5rap3Q99LM2 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Cdk5rap3Q99LM2 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
Cdk5rap3Q99LM2 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.02
Cdk5rap3Q99LM2 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Cdk5rap3Q99LM2 Gm9252-201ENSMUST00000172364 1602 ntBASIC14.95□□□□□ -0.02
Cdk5rap3Q99LM2 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Cdk5rap3Q99LM2 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cdk5rap3Q99LM2 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cdk5rap3Q99LM2 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cdk5rap3Q99LM2 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms