Protein–RNA interactions for Protein: Q99LF4

Rtcb, tRNA-splicing ligase RtcB homolog, mousemouse

Known RBP Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RtcbQ99LF4 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RtcbQ99LF4 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
RtcbQ99LF4 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
RtcbQ99LF4 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
RtcbQ99LF4 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
RtcbQ99LF4 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
RtcbQ99LF4 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RtcbQ99LF4 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RtcbQ99LF4 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RtcbQ99LF4 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
RtcbQ99LF4 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
RtcbQ99LF4 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
RtcbQ99LF4 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RtcbQ99LF4 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RtcbQ99LF4 Gm12928-201ENSMUST00000117115 573 ntBASIC17.72■□□□□ 0.43
RtcbQ99LF4 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC17.72■□□□□ 0.43
RtcbQ99LF4 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC17.72■□□□□ 0.43
RtcbQ99LF4 Pyy-204ENSMUST00000177304 551 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
RtcbQ99LF4 Gm27847-201ENSMUST00000183711 107 ntBASIC17.72■□□□□ 0.43
RtcbQ99LF4 Gm27375-201ENSMUST00000183799 107 ntBASIC17.72■□□□□ 0.43
RtcbQ99LF4 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
RtcbQ99LF4 Gm19078-201ENSMUST00000206311 727 ntBASIC17.72■□□□□ 0.43
RtcbQ99LF4 AC159896.2-201ENSMUST00000214753 269 ntBASIC17.72■□□□□ 0.43
RtcbQ99LF4 AC154319.1-201ENSMUST00000216330 312 ntBASIC17.72■□□□□ 0.43
RtcbQ99LF4 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
RtcbQ99LF4 AL589735.1-201ENSMUST00000224353 270 ntBASIC17.72■□□□□ 0.43
RtcbQ99LF4 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RtcbQ99LF4 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RtcbQ99LF4 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RtcbQ99LF4 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RtcbQ99LF4 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
RtcbQ99LF4 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
RtcbQ99LF4 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
RtcbQ99LF4 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
RtcbQ99LF4 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RtcbQ99LF4 Gm8775-201ENSMUST00000170943 1327 ntBASIC17.72■□□□□ 0.43
RtcbQ99LF4 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RtcbQ99LF4 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RtcbQ99LF4 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC17.71■□□□□ 0.43
RtcbQ99LF4 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
RtcbQ99LF4 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
RtcbQ99LF4 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RtcbQ99LF4 Myadml2os-201ENSMUST00000126642 1044 ntTSL 5 BASIC17.71■□□□□ 0.43
RtcbQ99LF4 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
RtcbQ99LF4 Gm43094-201ENSMUST00000196549 921 ntBASIC17.71■□□□□ 0.43
RtcbQ99LF4 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC17.71■□□□□ 0.43
RtcbQ99LF4 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC17.71■□□□□ 0.43
RtcbQ99LF4 AC192088.1-201ENSMUST00000227561 301 ntBASIC17.71■□□□□ 0.43
RtcbQ99LF4 Gm8399-201ENSMUST00000082300 1117 ntBASIC17.71■□□□□ 0.43
RtcbQ99LF4 Gm6091-201ENSMUST00000098307 165 ntBASIC17.71■□□□□ 0.43
RtcbQ99LF4 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RtcbQ99LF4 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
RtcbQ99LF4 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
RtcbQ99LF4 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
RtcbQ99LF4 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC17.71■□□□□ 0.43
RtcbQ99LF4 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RtcbQ99LF4 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RtcbQ99LF4 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.42
RtcbQ99LF4 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RtcbQ99LF4 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
RtcbQ99LF4 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RtcbQ99LF4 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RtcbQ99LF4 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RtcbQ99LF4 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
RtcbQ99LF4 Gm15198-201ENSMUST00000117283 177 ntBASIC17.7■□□□□ 0.42
RtcbQ99LF4 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
RtcbQ99LF4 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC17.7■□□□□ 0.42
RtcbQ99LF4 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
RtcbQ99LF4 Ighv8-14-201ENSMUST00000196781 358 ntBASIC17.7■□□□□ 0.42
RtcbQ99LF4 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC17.7■□□□□ 0.42
RtcbQ99LF4 Gm44974-201ENSMUST00000206387 1279 ntBASIC17.7■□□□□ 0.42
RtcbQ99LF4 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
RtcbQ99LF4 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RtcbQ99LF4 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC17.7■□□□□ 0.42
RtcbQ99LF4 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC17.7■□□□□ 0.42
RtcbQ99LF4 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
RtcbQ99LF4 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC17.7■□□□□ 0.42
RtcbQ99LF4 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
RtcbQ99LF4 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RtcbQ99LF4 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
RtcbQ99LF4 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
RtcbQ99LF4 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
RtcbQ99LF4 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RtcbQ99LF4 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RtcbQ99LF4 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RtcbQ99LF4 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RtcbQ99LF4 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
RtcbQ99LF4 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC17.69■□□□□ 0.42
RtcbQ99LF4 AC093043.3-201ENSMUST00000226531 2273 ntBASIC17.69■□□□□ 0.42
RtcbQ99LF4 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RtcbQ99LF4 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RtcbQ99LF4 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RtcbQ99LF4 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RtcbQ99LF4 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RtcbQ99LF4 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
RtcbQ99LF4 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC17.69■□□□□ 0.42
RtcbQ99LF4 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RtcbQ99LF4 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC17.69■□□□□ 0.42
RtcbQ99LF4 Gm11524-201ENSMUST00000119349 807 ntBASIC17.69■□□□□ 0.42
RtcbQ99LF4 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC17.69■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 35.7 ms