Protein–RNA interactions for Protein: Q921M3

Sf3b3, Splicing factor 3B subunit 3, mousemouse

Known RBP Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b3Q921M3 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Sf3b3Q921M3 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
Sf3b3Q921M3 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC17.27■□□□□ 0.36
Sf3b3Q921M3 Gm18905-201ENSMUST00000205454 928 ntBASIC17.27■□□□□ 0.36
Sf3b3Q921M3 Gm18027-201ENSMUST00000218947 619 ntBASIC17.27■□□□□ 0.36
Sf3b3Q921M3 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Sf3b3Q921M3 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
Sf3b3Q921M3 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Sf3b3Q921M3 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC17.27■□□□□ 0.36
Sf3b3Q921M3 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Sf3b3Q921M3 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Sf3b3Q921M3 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Sf3b3Q921M3 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Sf3b3Q921M3 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Sf3b3Q921M3 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
Sf3b3Q921M3 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Sf3b3Q921M3 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Sf3b3Q921M3 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Sf3b3Q921M3 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Sf3b3Q921M3 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC17.26■□□□□ 0.35
Sf3b3Q921M3 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC17.26■□□□□ 0.35
Sf3b3Q921M3 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Sf3b3Q921M3 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Sf3b3Q921M3 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC17.26■□□□□ 0.35
Sf3b3Q921M3 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Sf3b3Q921M3 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Sf3b3Q921M3 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Sf3b3Q921M3 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC17.26■□□□□ 0.35
Sf3b3Q921M3 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Sf3b3Q921M3 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Sf3b3Q921M3 Gm9109-201ENSMUST00000120254 1405 ntBASIC17.26■□□□□ 0.35
Sf3b3Q921M3 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Sf3b3Q921M3 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Sf3b3Q921M3 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Sf3b3Q921M3 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC17.26■□□□□ 0.35
Sf3b3Q921M3 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Sf3b3Q921M3 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Sf3b3Q921M3 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Sf3b3Q921M3 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Sf3b3Q921M3 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Sf3b3Q921M3 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Sf3b3Q921M3 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Sf3b3Q921M3 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Sf3b3Q921M3 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Sf3b3Q921M3 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Sf3b3Q921M3 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Sf3b3Q921M3 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Sf3b3Q921M3 Gm15824-201ENSMUST00000119516 955 ntBASIC17.25■□□□□ 0.35
Sf3b3Q921M3 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Sf3b3Q921M3 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Sf3b3Q921M3 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC17.25■□□□□ 0.35
Sf3b3Q921M3 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Sf3b3Q921M3 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Sf3b3Q921M3 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Sf3b3Q921M3 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Sf3b3Q921M3 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Sf3b3Q921M3 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC17.25■□□□□ 0.35
Sf3b3Q921M3 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Sf3b3Q921M3 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC17.25■□□□□ 0.35
Sf3b3Q921M3 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
Sf3b3Q921M3 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Sf3b3Q921M3 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Sf3b3Q921M3 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Sf3b3Q921M3 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Sf3b3Q921M3 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Sf3b3Q921M3 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Sf3b3Q921M3 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Sf3b3Q921M3 Camk2g-217ENSMUST00000226630 1937 ntBASIC17.24■□□□□ 0.35
Sf3b3Q921M3 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Sf3b3Q921M3 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Sf3b3Q921M3 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC17.24■□□□□ 0.35
Sf3b3Q921M3 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
Sf3b3Q921M3 Gm27892-201ENSMUST00000185017 106 ntBASIC17.24■□□□□ 0.35
Sf3b3Q921M3 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Sf3b3Q921M3 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Sf3b3Q921M3 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Sf3b3Q921M3 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Sf3b3Q921M3 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Sf3b3Q921M3 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Sf3b3Q921M3 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Sf3b3Q921M3 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Sf3b3Q921M3 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Sf3b3Q921M3 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Sf3b3Q921M3 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Sf3b3Q921M3 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Sf3b3Q921M3 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Sf3b3Q921M3 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC17.23■□□□□ 0.35
Sf3b3Q921M3 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Sf3b3Q921M3 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Sf3b3Q921M3 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC17.23■□□□□ 0.35
Sf3b3Q921M3 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Sf3b3Q921M3 Mtmr2-209ENSMUST00000156801 617 ntTSL 5 BASIC17.23■□□□□ 0.35
Sf3b3Q921M3 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Sf3b3Q921M3 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Sf3b3Q921M3 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Sf3b3Q921M3 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Sf3b3Q921M3 Olfr455-201ENSMUST00000171307 954 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Sf3b3Q921M3 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Sf3b3Q921M3 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Sf3b3Q921M3 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC17.23■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 39.6 ms