Protein–RNA interactions for Protein: Q91Y08

Pcdhb1, Protocadherin beta 1, mousemouse

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb1Q91Y08 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC15.03■□□□□ -0
Pcdhb1Q91Y08 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC15.03■□□□□ -0
Pcdhb1Q91Y08 Rprl2-201ENSMUST00000157150 290 ntBASIC15.03■□□□□ -0
Pcdhb1Q91Y08 AC155252.2-201ENSMUST00000226946 680 ntBASIC15.03■□□□□ -0
Pcdhb1Q91Y08 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Pcdhb1Q91Y08 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC15.03■□□□□ -0
Pcdhb1Q91Y08 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC15.03■□□□□ -0
Pcdhb1Q91Y08 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Pcdhb1Q91Y08 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Pcdhb1Q91Y08 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Pcdhb1Q91Y08 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC15.03■□□□□ -0
Pcdhb1Q91Y08 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Pcdhb1Q91Y08 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Pcdhb1Q91Y08 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Pcdhb1Q91Y08 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC15.03■□□□□ -0
Pcdhb1Q91Y08 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Pcdhb1Q91Y08 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Pcdhb1Q91Y08 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC15.02■□□□□ -0
Pcdhb1Q91Y08 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Pcdhb1Q91Y08 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Pcdhb1Q91Y08 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Pcdhb1Q91Y08 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC15.02■□□□□ -0
Pcdhb1Q91Y08 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Pcdhb1Q91Y08 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Pcdhb1Q91Y08 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
Pcdhb1Q91Y08 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Pcdhb1Q91Y08 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Pcdhb1Q91Y08 Gm11745-201ENSMUST00000121669 448 ntBASIC15.02■□□□□ -0
Pcdhb1Q91Y08 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC15.02■□□□□ -0
Pcdhb1Q91Y08 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC15.02■□□□□ -0
Pcdhb1Q91Y08 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC15.02■□□□□ -0
Pcdhb1Q91Y08 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC15.02■□□□□ -0
Pcdhb1Q91Y08 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC15.02■□□□□ -0
Pcdhb1Q91Y08 Gm27494-201ENSMUST00000184735 189 ntBASIC15.02■□□□□ -0
Pcdhb1Q91Y08 Gm43073-201ENSMUST00000198200 1189 ntBASIC15.02■□□□□ -0
Pcdhb1Q91Y08 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Pcdhb1Q91Y08 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Pcdhb1Q91Y08 AC123645.1-201ENSMUST00000228469 605 ntBASIC15.02■□□□□ -0
Pcdhb1Q91Y08 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Pcdhb1Q91Y08 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Pcdhb1Q91Y08 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Pcdhb1Q91Y08 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Pcdhb1Q91Y08 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Pcdhb1Q91Y08 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Pcdhb1Q91Y08 Gm37912-201ENSMUST00000191895 3076 ntBASIC15.02□□□□□ -0.01
Pcdhb1Q91Y08 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Pcdhb1Q91Y08 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
Pcdhb1Q91Y08 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Pcdhb1Q91Y08 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Pcdhb1Q91Y08 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Pcdhb1Q91Y08 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Pcdhb1Q91Y08 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC15.02□□□□□ -0.01
Pcdhb1Q91Y08 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Pcdhb1Q91Y08 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Pcdhb1Q91Y08 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Pcdhb1Q91Y08 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC15.01□□□□□ -0.01
Pcdhb1Q91Y08 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Pcdhb1Q91Y08 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Pcdhb1Q91Y08 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Pcdhb1Q91Y08 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Pcdhb1Q91Y08 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Pcdhb1Q91Y08 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
Pcdhb1Q91Y08 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Pcdhb1Q91Y08 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Pcdhb1Q91Y08 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Pcdhb1Q91Y08 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Pcdhb1Q91Y08 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC15.01□□□□□ -0.01
Pcdhb1Q91Y08 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC15.01□□□□□ -0.01
Pcdhb1Q91Y08 Gm4995-201ENSMUST00000117247 432 ntBASIC15.01□□□□□ -0.01
Pcdhb1Q91Y08 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Pcdhb1Q91Y08 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Pcdhb1Q91Y08 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC15.01□□□□□ -0.01
Pcdhb1Q91Y08 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC15.01□□□□□ -0.01
Pcdhb1Q91Y08 AC102291.3-201ENSMUST00000226566 405 ntBASIC15.01□□□□□ -0.01
Pcdhb1Q91Y08 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Pcdhb1Q91Y08 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Pcdhb1Q91Y08 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Pcdhb1Q91Y08 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Pcdhb1Q91Y08 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Pcdhb1Q91Y08 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Pcdhb1Q91Y08 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Pcdhb1Q91Y08 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Pcdhb1Q91Y08 Nudt18-203ENSMUST00000228768 1578 ntBASIC15.01□□□□□ -0.01
Pcdhb1Q91Y08 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Pcdhb1Q91Y08 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Pcdhb1Q91Y08 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Pcdhb1Q91Y08 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Pcdhb1Q91Y08 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Pcdhb1Q91Y08 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Pcdhb1Q91Y08 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Pcdhb1Q91Y08 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Pcdhb1Q91Y08 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC15□□□□□ -0.01
Pcdhb1Q91Y08 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC15□□□□□ -0.01
Pcdhb1Q91Y08 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC15□□□□□ -0.01
Pcdhb1Q91Y08 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Pcdhb1Q91Y08 Mir1895-201ENSMUST00000122615 79 ntBASIC15□□□□□ -0.01
Pcdhb1Q91Y08 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC15□□□□□ -0.01
Pcdhb1Q91Y08 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Pcdhb1Q91Y08 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC15□□□□□ -0.01
Pcdhb1Q91Y08 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC15□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 58.1 ms