Protein–RNA interactions for Protein: Q91Y00

Pcdhb2, Protocadherin beta 2, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb2Q91Y00 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Pcdhb2Q91Y00 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Pcdhb2Q91Y00 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdhb2Q91Y00 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdhb2Q91Y00 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdhb2Q91Y00 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdhb2Q91Y00 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC15.35■□□□□ 0.05
Pcdhb2Q91Y00 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdhb2Q91Y00 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdhb2Q91Y00 Camk2g-217ENSMUST00000226630 1937 ntBASIC15.35■□□□□ 0.05
Pcdhb2Q91Y00 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdhb2Q91Y00 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
Pcdhb2Q91Y00 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdhb2Q91Y00 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdhb2Q91Y00 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdhb2Q91Y00 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdhb2Q91Y00 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdhb2Q91Y00 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdhb2Q91Y00 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdhb2Q91Y00 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
Pcdhb2Q91Y00 Gm13015-201ENSMUST00000118674 204 ntBASIC15.35■□□□□ 0.05
Pcdhb2Q91Y00 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdhb2Q91Y00 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdhb2Q91Y00 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdhb2Q91Y00 AC154767.3-201ENSMUST00000225150 1342 ntBASIC15.35■□□□□ 0.05
Pcdhb2Q91Y00 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC15.35■□□□□ 0.05
Pcdhb2Q91Y00 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdhb2Q91Y00 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC15.35■□□□□ 0.05
Pcdhb2Q91Y00 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdhb2Q91Y00 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC15.35■□□□□ 0.05
Pcdhb2Q91Y00 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC15.35■□□□□ 0.05
Pcdhb2Q91Y00 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdhb2Q91Y00 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdhb2Q91Y00 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdhb2Q91Y00 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdhb2Q91Y00 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdhb2Q91Y00 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdhb2Q91Y00 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdhb2Q91Y00 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdhb2Q91Y00 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdhb2Q91Y00 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
Pcdhb2Q91Y00 Gm7336-201ENSMUST00000107041 1232 ntBASIC15.34■□□□□ 0.05
Pcdhb2Q91Y00 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC15.34■□□□□ 0.05
Pcdhb2Q91Y00 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdhb2Q91Y00 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdhb2Q91Y00 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdhb2Q91Y00 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Pcdhb2Q91Y00 Gm37230-201ENSMUST00000194491 818 ntBASIC15.34■□□□□ 0.05
Pcdhb2Q91Y00 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC15.34■□□□□ 0.05
Pcdhb2Q91Y00 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdhb2Q91Y00 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdhb2Q91Y00 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdhb2Q91Y00 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdhb2Q91Y00 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdhb2Q91Y00 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
Pcdhb2Q91Y00 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdhb2Q91Y00 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdhb2Q91Y00 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdhb2Q91Y00 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Pcdhb2Q91Y00 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
Pcdhb2Q91Y00 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdhb2Q91Y00 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdhb2Q91Y00 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC15.34■□□□□ 0.05
Pcdhb2Q91Y00 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdhb2Q91Y00 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdhb2Q91Y00 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Pcdhb2Q91Y00 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.05
Pcdhb2Q91Y00 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.05
Pcdhb2Q91Y00 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.05
Pcdhb2Q91Y00 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
Pcdhb2Q91Y00 AC174678.1-201ENSMUST00000228007 2749 ntBASIC15.33■□□□□ 0.05
Pcdhb2Q91Y00 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Pcdhb2Q91Y00 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Pcdhb2Q91Y00 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Pcdhb2Q91Y00 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Pcdhb2Q91Y00 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
Pcdhb2Q91Y00 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Pcdhb2Q91Y00 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Pcdhb2Q91Y00 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Pcdhb2Q91Y00 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Pcdhb2Q91Y00 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC15.33■□□□□ 0.04
Pcdhb2Q91Y00 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
Pcdhb2Q91Y00 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
Pcdhb2Q91Y00 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC15.33■□□□□ 0.04
Pcdhb2Q91Y00 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Pcdhb2Q91Y00 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Pcdhb2Q91Y00 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Pcdhb2Q91Y00 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC15.33■□□□□ 0.04
Pcdhb2Q91Y00 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Pcdhb2Q91Y00 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
Pcdhb2Q91Y00 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Pcdhb2Q91Y00 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Pcdhb2Q91Y00 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Pcdhb2Q91Y00 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
Pcdhb2Q91Y00 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdhb2Q91Y00 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdhb2Q91Y00 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdhb2Q91Y00 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Pcdhb2Q91Y00 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdhb2Q91Y00 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 44.9 ms