Protein–RNA interactions for Protein: Q91XY4

Pcdhga4, Protocadherin gamma-A4, mousemouse

Predictions only

Length 930 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga4Q91XY4 Gm18889-201ENSMUST00000174284 929 ntBASIC14.26□□□□□ -0.13
Pcdhga4Q91XY4 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Pcdhga4Q91XY4 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC14.26□□□□□ -0.13
Pcdhga4Q91XY4 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Pcdhga4Q91XY4 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdhga4Q91XY4 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdhga4Q91XY4 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdhga4Q91XY4 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Pcdhga4Q91XY4 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdhga4Q91XY4 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdhga4Q91XY4 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdhga4Q91XY4 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdhga4Q91XY4 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdhga4Q91XY4 AC167013.2-201ENSMUST00000228520 2684 ntBASIC14.26□□□□□ -0.13
Pcdhga4Q91XY4 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC14.26□□□□□ -0.13
Pcdhga4Q91XY4 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdhga4Q91XY4 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdhga4Q91XY4 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC14.25□□□□□ -0.13
Pcdhga4Q91XY4 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdhga4Q91XY4 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
Pcdhga4Q91XY4 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdhga4Q91XY4 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdhga4Q91XY4 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Pcdhga4Q91XY4 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdhga4Q91XY4 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdhga4Q91XY4 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC14.25□□□□□ -0.13
Pcdhga4Q91XY4 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdhga4Q91XY4 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdhga4Q91XY4 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdhga4Q91XY4 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC14.25□□□□□ -0.13
Pcdhga4Q91XY4 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC14.25□□□□□ -0.13
Pcdhga4Q91XY4 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC14.25□□□□□ -0.13
Pcdhga4Q91XY4 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdhga4Q91XY4 Mir6990-201ENSMUST00000183724 91 ntBASIC14.25□□□□□ -0.13
Pcdhga4Q91XY4 Gm5312-201ENSMUST00000203728 547 ntBASIC14.25□□□□□ -0.13
Pcdhga4Q91XY4 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC14.25□□□□□ -0.13
Pcdhga4Q91XY4 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC14.25□□□□□ -0.13
Pcdhga4Q91XY4 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdhga4Q91XY4 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdhga4Q91XY4 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdhga4Q91XY4 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdhga4Q91XY4 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdhga4Q91XY4 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdhga4Q91XY4 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC14.25□□□□□ -0.13
Pcdhga4Q91XY4 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdhga4Q91XY4 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdhga4Q91XY4 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdhga4Q91XY4 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdhga4Q91XY4 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdhga4Q91XY4 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdhga4Q91XY4 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdhga4Q91XY4 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Pcdhga4Q91XY4 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdhga4Q91XY4 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdhga4Q91XY4 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Pcdhga4Q91XY4 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
Pcdhga4Q91XY4 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdhga4Q91XY4 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdhga4Q91XY4 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdhga4Q91XY4 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Pcdhga4Q91XY4 Gm37297-201ENSMUST00000192974 2384 ntBASIC14.24□□□□□ -0.13
Pcdhga4Q91XY4 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdhga4Q91XY4 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdhga4Q91XY4 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Pcdhga4Q91XY4 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdhga4Q91XY4 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdhga4Q91XY4 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Pcdhga4Q91XY4 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdhga4Q91XY4 AC131743.5-201ENSMUST00000220775 1618 ntBASIC14.24□□□□□ -0.13
Pcdhga4Q91XY4 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdhga4Q91XY4 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdhga4Q91XY4 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdhga4Q91XY4 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC14.24□□□□□ -0.13
Pcdhga4Q91XY4 Gm20553-201ENSMUST00000204205 844 ntBASIC14.24□□□□□ -0.13
Pcdhga4Q91XY4 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdhga4Q91XY4 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdhga4Q91XY4 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdhga4Q91XY4 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdhga4Q91XY4 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC14.24□□□□□ -0.13
Pcdhga4Q91XY4 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC14.24□□□□□ -0.13
Pcdhga4Q91XY4 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdhga4Q91XY4 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Pcdhga4Q91XY4 Nudt18-203ENSMUST00000228768 1578 ntBASIC14.24□□□□□ -0.13
Pcdhga4Q91XY4 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdhga4Q91XY4 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdhga4Q91XY4 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdhga4Q91XY4 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdhga4Q91XY4 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdhga4Q91XY4 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdhga4Q91XY4 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdhga4Q91XY4 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdhga4Q91XY4 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdhga4Q91XY4 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC14.24□□□□□ -0.13
Pcdhga4Q91XY4 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Pcdhga4Q91XY4 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pcdhga4Q91XY4 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pcdhga4Q91XY4 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Pcdhga4Q91XY4 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pcdhga4Q91XY4 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Pcdhga4Q91XY4 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms