Protein–RNA interactions for Protein: Q91XB0

Trex1, Three-prime repair exonuclease 1, mousemouse

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trex1Q91XB0 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trex1Q91XB0 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trex1Q91XB0 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trex1Q91XB0 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Trex1Q91XB0 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trex1Q91XB0 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trex1Q91XB0 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trex1Q91XB0 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Trex1Q91XB0 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trex1Q91XB0 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trex1Q91XB0 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trex1Q91XB0 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC16.51■□□□□ 0.23
Trex1Q91XB0 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
Trex1Q91XB0 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trex1Q91XB0 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC16.5■□□□□ 0.23
Trex1Q91XB0 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
Trex1Q91XB0 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trex1Q91XB0 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trex1Q91XB0 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trex1Q91XB0 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Trex1Q91XB0 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trex1Q91XB0 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC16.5■□□□□ 0.23
Trex1Q91XB0 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trex1Q91XB0 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC16.5■□□□□ 0.23
Trex1Q91XB0 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trex1Q91XB0 Mir6392-201ENSMUST00000184924 108 ntBASIC16.5■□□□□ 0.23
Trex1Q91XB0 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Trex1Q91XB0 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Trex1Q91XB0 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trex1Q91XB0 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Trex1Q91XB0 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trex1Q91XB0 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trex1Q91XB0 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Trex1Q91XB0 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trex1Q91XB0 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trex1Q91XB0 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trex1Q91XB0 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trex1Q91XB0 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trex1Q91XB0 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
Trex1Q91XB0 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
Trex1Q91XB0 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Trex1Q91XB0 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Trex1Q91XB0 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC16.49■□□□□ 0.23
Trex1Q91XB0 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC16.49■□□□□ 0.23
Trex1Q91XB0 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trex1Q91XB0 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trex1Q91XB0 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Trex1Q91XB0 Ldha-ps-201ENSMUST00000119390 995 ntBASIC16.49■□□□□ 0.23
Trex1Q91XB0 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC16.49■□□□□ 0.23
Trex1Q91XB0 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC16.49■□□□□ 0.23
Trex1Q91XB0 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC16.49■□□□□ 0.23
Trex1Q91XB0 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC16.49■□□□□ 0.23
Trex1Q91XB0 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
Trex1Q91XB0 Gm18187-201ENSMUST00000196476 984 ntBASIC16.49■□□□□ 0.23
Trex1Q91XB0 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC16.49■□□□□ 0.23
Trex1Q91XB0 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Trex1Q91XB0 AC139580.1-202ENSMUST00000223574 928 ntBASIC16.49■□□□□ 0.23
Trex1Q91XB0 AC154687.2-201ENSMUST00000223853 640 ntBASIC16.49■□□□□ 0.23
Trex1Q91XB0 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trex1Q91XB0 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trex1Q91XB0 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trex1Q91XB0 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trex1Q91XB0 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trex1Q91XB0 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Trex1Q91XB0 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trex1Q91XB0 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trex1Q91XB0 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Trex1Q91XB0 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Trex1Q91XB0 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trex1Q91XB0 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Trex1Q91XB0 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC16.48■□□□□ 0.23
Trex1Q91XB0 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trex1Q91XB0 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC16.48■□□□□ 0.23
Trex1Q91XB0 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trex1Q91XB0 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC16.48■□□□□ 0.23
Trex1Q91XB0 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Trex1Q91XB0 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Trex1Q91XB0 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trex1Q91XB0 AC166574.6-201ENSMUST00000227889 1806 ntBASIC16.48■□□□□ 0.23
Trex1Q91XB0 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trex1Q91XB0 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trex1Q91XB0 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC16.48■□□□□ 0.23
Trex1Q91XB0 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC16.48■□□□□ 0.23
Trex1Q91XB0 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
Trex1Q91XB0 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Trex1Q91XB0 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
Trex1Q91XB0 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
Trex1Q91XB0 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC16.48■□□□□ 0.23
Trex1Q91XB0 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
Trex1Q91XB0 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trex1Q91XB0 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trex1Q91XB0 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trex1Q91XB0 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trex1Q91XB0 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC16.48■□□□□ 0.23
Trex1Q91XB0 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trex1Q91XB0 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC16.48■□□□□ 0.23
Trex1Q91XB0 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Trex1Q91XB0 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trex1Q91XB0 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trex1Q91XB0 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 39.8 ms