Protein–RNA interactions for Protein: Q91VN6

Ddx41, Probable ATP-dependent RNA helicase DDX41, mousemouse

Known RBP Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx41Q91VN6 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Ddx41Q91VN6 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ddx41Q91VN6 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ddx41Q91VN6 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Ddx41Q91VN6 Gm27920-201ENSMUST00000183953 96 ntBASIC16.61■□□□□ 0.25
Ddx41Q91VN6 Gm37277-201ENSMUST00000194052 1111 ntBASIC16.61■□□□□ 0.25
Ddx41Q91VN6 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Ddx41Q91VN6 Gm43767-201ENSMUST00000198933 381 ntBASIC16.61■□□□□ 0.25
Ddx41Q91VN6 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ddx41Q91VN6 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Ddx41Q91VN6 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ddx41Q91VN6 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ddx41Q91VN6 Gm42934-201ENSMUST00000196920 1345 ntBASIC16.61■□□□□ 0.25
Ddx41Q91VN6 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ddx41Q91VN6 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Ddx41Q91VN6 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC16.61■□□□□ 0.25
Ddx41Q91VN6 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Ddx41Q91VN6 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ddx41Q91VN6 Gm8242-201ENSMUST00000193029 1420 ntBASIC16.61■□□□□ 0.25
Ddx41Q91VN6 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ddx41Q91VN6 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Ddx41Q91VN6 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Ddx41Q91VN6 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ddx41Q91VN6 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC16.6■□□□□ 0.25
Ddx41Q91VN6 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC16.6■□□□□ 0.25
Ddx41Q91VN6 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ddx41Q91VN6 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Ddx41Q91VN6 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Ddx41Q91VN6 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ddx41Q91VN6 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Ddx41Q91VN6 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ddx41Q91VN6 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
Ddx41Q91VN6 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC16.6■□□□□ 0.25
Ddx41Q91VN6 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC16.6■□□□□ 0.25
Ddx41Q91VN6 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC16.6■□□□□ 0.25
Ddx41Q91VN6 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC16.6■□□□□ 0.25
Ddx41Q91VN6 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC16.6■□□□□ 0.25
Ddx41Q91VN6 Gm27622-201ENSMUST00000183779 60 ntBASIC16.6■□□□□ 0.25
Ddx41Q91VN6 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ddx41Q91VN6 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
Ddx41Q91VN6 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ddx41Q91VN6 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC16.6■□□□□ 0.25
Ddx41Q91VN6 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ddx41Q91VN6 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ddx41Q91VN6 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ddx41Q91VN6 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ddx41Q91VN6 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ddx41Q91VN6 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ddx41Q91VN6 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ddx41Q91VN6 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ddx41Q91VN6 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC16.6■□□□□ 0.25
Ddx41Q91VN6 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Ddx41Q91VN6 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ddx41Q91VN6 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ddx41Q91VN6 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ddx41Q91VN6 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Ddx41Q91VN6 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ddx41Q91VN6 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ddx41Q91VN6 Gm38391-201ENSMUST00000191720 4069 ntBASIC16.59■□□□□ 0.25
Ddx41Q91VN6 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ddx41Q91VN6 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC16.59■□□□□ 0.25
Ddx41Q91VN6 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC16.59■□□□□ 0.25
Ddx41Q91VN6 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Ddx41Q91VN6 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Ddx41Q91VN6 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC16.59■□□□□ 0.25
Ddx41Q91VN6 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ddx41Q91VN6 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ddx41Q91VN6 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ddx41Q91VN6 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ddx41Q91VN6 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Ddx41Q91VN6 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC16.59■□□□□ 0.25
Ddx41Q91VN6 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Ddx41Q91VN6 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC16.59■□□□□ 0.25
Ddx41Q91VN6 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC16.59■□□□□ 0.25
Ddx41Q91VN6 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC16.59■□□□□ 0.25
Ddx41Q91VN6 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ddx41Q91VN6 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ddx41Q91VN6 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ddx41Q91VN6 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC16.59■□□□□ 0.25
Ddx41Q91VN6 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC16.59■□□□□ 0.25
Ddx41Q91VN6 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ddx41Q91VN6 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ddx41Q91VN6 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
Ddx41Q91VN6 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ddx41Q91VN6 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ddx41Q91VN6 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC16.59■□□□□ 0.25
Ddx41Q91VN6 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ddx41Q91VN6 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ddx41Q91VN6 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ddx41Q91VN6 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Ddx41Q91VN6 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
Ddx41Q91VN6 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC16.58■□□□□ 0.25
Ddx41Q91VN6 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Ddx41Q91VN6 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
Ddx41Q91VN6 Gm6415-201ENSMUST00000118488 348 ntBASIC16.58■□□□□ 0.24
Ddx41Q91VN6 Gm9824-201ENSMUST00000178707 561 ntBASIC16.58■□□□□ 0.24
Ddx41Q91VN6 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC16.58■□□□□ 0.24
Ddx41Q91VN6 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC16.58■□□□□ 0.24
Ddx41Q91VN6 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ddx41Q91VN6 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms