Protein–RNA interactions for Protein: Q8VEE4

Rpa1, Replication protein A 70 kDa DNA-binding subunit, mousemouse

Known RBP Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa1Q8VEE4 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC14.59□□□□□ -0.07
Rpa1Q8VEE4 Gm27357-201ENSMUST00000183754 135 ntBASIC14.59□□□□□ -0.07
Rpa1Q8VEE4 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC14.59□□□□□ -0.07
Rpa1Q8VEE4 AC153961.1-201ENSMUST00000217760 385 ntBASIC14.59□□□□□ -0.07
Rpa1Q8VEE4 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Rpa1Q8VEE4 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
Rpa1Q8VEE4 Gm42872-201ENSMUST00000200026 1967 ntBASIC14.59□□□□□ -0.07
Rpa1Q8VEE4 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Rpa1Q8VEE4 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Rpa1Q8VEE4 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Rpa1Q8VEE4 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Rpa1Q8VEE4 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Rpa1Q8VEE4 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Rpa1Q8VEE4 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Rpa1Q8VEE4 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Rpa1Q8VEE4 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC14.59□□□□□ -0.07
Rpa1Q8VEE4 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
Rpa1Q8VEE4 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
Rpa1Q8VEE4 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Rpa1Q8VEE4 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Rpa1Q8VEE4 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Rpa1Q8VEE4 Gm2420-202ENSMUST00000202224 2249 ntBASIC14.58□□□□□ -0.07
Rpa1Q8VEE4 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.07
Rpa1Q8VEE4 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC14.58□□□□□ -0.08
Rpa1Q8VEE4 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Rpa1Q8VEE4 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Rpa1Q8VEE4 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Rpa1Q8VEE4 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Rpa1Q8VEE4 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Rpa1Q8VEE4 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Rpa1Q8VEE4 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
Rpa1Q8VEE4 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Rpa1Q8VEE4 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Rpa1Q8VEE4 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
Rpa1Q8VEE4 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC14.58□□□□□ -0.08
Rpa1Q8VEE4 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
Rpa1Q8VEE4 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Rpa1Q8VEE4 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
Rpa1Q8VEE4 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Rpa1Q8VEE4 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Rpa1Q8VEE4 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Rpa1Q8VEE4 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Rpa1Q8VEE4 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC14.58□□□□□ -0.08
Rpa1Q8VEE4 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Rpa1Q8VEE4 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Rpa1Q8VEE4 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC14.58□□□□□ -0.08
Rpa1Q8VEE4 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Rpa1Q8VEE4 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Rpa1Q8VEE4 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Rpa1Q8VEE4 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
Rpa1Q8VEE4 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
Rpa1Q8VEE4 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
Rpa1Q8VEE4 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Rpa1Q8VEE4 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC14.58□□□□□ -0.08
Rpa1Q8VEE4 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Rpa1Q8VEE4 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Rpa1Q8VEE4 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
Rpa1Q8VEE4 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Rpa1Q8VEE4 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Rpa1Q8VEE4 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Rpa1Q8VEE4 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Rpa1Q8VEE4 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Rpa1Q8VEE4 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC14.57□□□□□ -0.08
Rpa1Q8VEE4 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Rpa1Q8VEE4 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC14.57□□□□□ -0.08
Rpa1Q8VEE4 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Rpa1Q8VEE4 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Rpa1Q8VEE4 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC14.57□□□□□ -0.08
Rpa1Q8VEE4 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Rpa1Q8VEE4 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Rpa1Q8VEE4 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Rpa1Q8VEE4 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
Rpa1Q8VEE4 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC14.57□□□□□ -0.08
Rpa1Q8VEE4 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Rpa1Q8VEE4 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC14.57□□□□□ -0.08
Rpa1Q8VEE4 Gm6296-201ENSMUST00000222599 943 ntBASIC14.57□□□□□ -0.08
Rpa1Q8VEE4 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Rpa1Q8VEE4 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Rpa1Q8VEE4 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Rpa1Q8VEE4 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Rpa1Q8VEE4 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Rpa1Q8VEE4 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Rpa1Q8VEE4 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC14.57□□□□□ -0.08
Rpa1Q8VEE4 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Rpa1Q8VEE4 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Rpa1Q8VEE4 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Rpa1Q8VEE4 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Rpa1Q8VEE4 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Rpa1Q8VEE4 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Rpa1Q8VEE4 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
Rpa1Q8VEE4 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC14.57□□□□□ -0.08
Rpa1Q8VEE4 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
Rpa1Q8VEE4 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC14.56□□□□□ -0.08
Rpa1Q8VEE4 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Rpa1Q8VEE4 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Rpa1Q8VEE4 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC14.56□□□□□ -0.08
Rpa1Q8VEE4 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC14.56□□□□□ -0.08
Rpa1Q8VEE4 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC14.56□□□□□ -0.08
Rpa1Q8VEE4 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Rpa1Q8VEE4 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC14.56□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 35.3 ms