Protein–RNA interactions for Protein: Q8R1C3

Vopp1, Vesicular, overexpressed in cancer, prosurvival protein 1, mousemouse

Predictions only

Length 172 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vopp1Q8R1C3 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC15.14■□□□□ 0.01
Vopp1Q8R1C3 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Vopp1Q8R1C3 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Vopp1Q8R1C3 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Vopp1Q8R1C3 Gm15806-201ENSMUST00000120696 955 ntBASIC15.14■□□□□ 0.01
Vopp1Q8R1C3 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC15.14■□□□□ 0.01
Vopp1Q8R1C3 Gm26464-201ENSMUST00000157094 305 ntBASIC15.14■□□□□ 0.01
Vopp1Q8R1C3 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Vopp1Q8R1C3 Gm17150-201ENSMUST00000165577 381 ntBASIC15.14■□□□□ 0.01
Vopp1Q8R1C3 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Vopp1Q8R1C3 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC15.14■□□□□ 0.01
Vopp1Q8R1C3 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC15.14■□□□□ 0.01
Vopp1Q8R1C3 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC15.14■□□□□ 0.01
Vopp1Q8R1C3 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Vopp1Q8R1C3 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Vopp1Q8R1C3 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Vopp1Q8R1C3 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Vopp1Q8R1C3 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Vopp1Q8R1C3 Gm8131-201ENSMUST00000213783 1570 ntBASIC15.14■□□□□ 0.01
Vopp1Q8R1C3 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Vopp1Q8R1C3 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Vopp1Q8R1C3 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Vopp1Q8R1C3 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC15.14■□□□□ 0.01
Vopp1Q8R1C3 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Vopp1Q8R1C3 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC15.14■□□□□ 0.01
Vopp1Q8R1C3 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Vopp1Q8R1C3 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Vopp1Q8R1C3 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Vopp1Q8R1C3 Gm5421-201ENSMUST00000181698 2354 ntBASIC15.13■□□□□ 0.01
Vopp1Q8R1C3 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Vopp1Q8R1C3 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC15.13■□□□□ 0.01
Vopp1Q8R1C3 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Vopp1Q8R1C3 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC15.13■□□□□ 0.01
Vopp1Q8R1C3 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Vopp1Q8R1C3 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Vopp1Q8R1C3 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Vopp1Q8R1C3 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Vopp1Q8R1C3 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Vopp1Q8R1C3 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Vopp1Q8R1C3 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Vopp1Q8R1C3 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Vopp1Q8R1C3 Gm11478-201ENSMUST00000117851 599 ntBASIC15.13■□□□□ 0.01
Vopp1Q8R1C3 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC15.13■□□□□ 0.01
Vopp1Q8R1C3 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Vopp1Q8R1C3 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Vopp1Q8R1C3 Ighv1-51-201ENSMUST00000192903 354 ntBASIC15.13■□□□□ 0.01
Vopp1Q8R1C3 Gm43433-201ENSMUST00000196573 481 ntBASIC15.13■□□□□ 0.01
Vopp1Q8R1C3 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Vopp1Q8R1C3 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Vopp1Q8R1C3 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Vopp1Q8R1C3 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Vopp1Q8R1C3 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Vopp1Q8R1C3 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Vopp1Q8R1C3 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Vopp1Q8R1C3 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Vopp1Q8R1C3 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Vopp1Q8R1C3 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Vopp1Q8R1C3 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Vopp1Q8R1C3 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Vopp1Q8R1C3 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Vopp1Q8R1C3 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Vopp1Q8R1C3 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Vopp1Q8R1C3 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
Vopp1Q8R1C3 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Vopp1Q8R1C3 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC15.12■□□□□ 0.01
Vopp1Q8R1C3 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Vopp1Q8R1C3 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Vopp1Q8R1C3 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
Vopp1Q8R1C3 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Vopp1Q8R1C3 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Vopp1Q8R1C3 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Vopp1Q8R1C3 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Vopp1Q8R1C3 Gm14127-201ENSMUST00000117906 678 ntBASIC15.12■□□□□ 0.01
Vopp1Q8R1C3 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC15.12■□□□□ 0.01
Vopp1Q8R1C3 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC15.12■□□□□ 0.01
Vopp1Q8R1C3 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC15.12■□□□□ 0.01
Vopp1Q8R1C3 Gm18307-201ENSMUST00000206864 949 ntBASIC15.12■□□□□ 0.01
Vopp1Q8R1C3 Gm5425-201ENSMUST00000214125 459 ntBASIC15.12■□□□□ 0.01
Vopp1Q8R1C3 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Vopp1Q8R1C3 AC149294.4-201ENSMUST00000227870 882 ntBASIC15.12■□□□□ 0.01
Vopp1Q8R1C3 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Vopp1Q8R1C3 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Vopp1Q8R1C3 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Vopp1Q8R1C3 Gm9347-201ENSMUST00000211473 1607 ntBASIC15.12■□□□□ 0.01
Vopp1Q8R1C3 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Vopp1Q8R1C3 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Vopp1Q8R1C3 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Vopp1Q8R1C3 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Vopp1Q8R1C3 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Vopp1Q8R1C3 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Vopp1Q8R1C3 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Vopp1Q8R1C3 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Vopp1Q8R1C3 Gm44981-201ENSMUST00000205549 1943 ntBASIC15.11■□□□□ 0.01
Vopp1Q8R1C3 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Vopp1Q8R1C3 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Vopp1Q8R1C3 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Vopp1Q8R1C3 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Vopp1Q8R1C3 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC15.11■□□□□ 0.01
Vopp1Q8R1C3 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Vopp1Q8R1C3 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 42.1 ms